Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YBX1P67809 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YBX1P67809 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YBX1P67809 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YBX1P67809 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.53■□□□□ 0.08
YBX1P67809 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YBX1P67809 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
YBX1P67809 BNIP3P1-202ENST00000550043 1585 ntBASIC15.53■□□□□ 0.08
YBX1P67809 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.53■□□□□ 0.08
YBX1P67809 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YBX1P67809 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
YBX1P67809 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.52■□□□□ 0.08
YBX1P67809 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YBX1P67809 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YBX1P67809 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YBX1P67809 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.52■□□□□ 0.08
YBX1P67809 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
YBX1P67809 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
YBX1P67809 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YBX1P67809 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.52■□□□□ 0.08
YBX1P67809 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
YBX1P67809 FO538757.1-201ENST00000623083 1397 ntBASIC15.52■□□□□ 0.08
YBX1P67809 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.52■□□□□ 0.08
YBX1P67809 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YBX1P67809 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
YBX1P67809 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
YBX1P67809 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YBX1P67809 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.52■□□□□ 0.08
YBX1P67809 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YBX1P67809 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YBX1P67809 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.52■□□□□ 0.08
YBX1P67809 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
YBX1P67809 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
YBX1P67809 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YBX1P67809 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
YBX1P67809 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.52■□□□□ 0.08
YBX1P67809 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.52■□□□□ 0.08
YBX1P67809 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.52■□□□□ 0.08
YBX1P67809 TREML5P-201ENST00000421694 576 ntBASIC15.52■□□□□ 0.08
YBX1P67809 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.52■□□□□ 0.08
YBX1P67809 CNN2P2-201ENST00000443536 909 ntBASIC15.52■□□□□ 0.08
YBX1P67809 FAM86GP-201ENST00000448322 971 ntBASIC15.52■□□□□ 0.08
YBX1P67809 CNN2P3-201ENST00000450201 906 ntBASIC15.52■□□□□ 0.08
YBX1P67809 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.52■□□□□ 0.08
YBX1P67809 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.52■□□□□ 0.08
YBX1P67809 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.52■□□□□ 0.08
YBX1P67809 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.52■□□□□ 0.08
YBX1P67809 AL136317.3-201ENST00000618497 906 ntBASIC15.52■□□□□ 0.08
YBX1P67809 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
YBX1P67809 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
YBX1P67809 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
YBX1P67809 CYP4F24P-201ENST00000586049 1580 ntBASIC15.52■□□□□ 0.07
YBX1P67809 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.52■□□□□ 0.07
YBX1P67809 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.52■□□□□ 0.07
YBX1P67809 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
YBX1P67809 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
YBX1P67809 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
YBX1P67809 AC006486.2-201ENST00000624246 2199 ntBASIC15.52■□□□□ 0.07
YBX1P67809 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.52■□□□□ 0.07
YBX1P67809 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
YBX1P67809 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.52■□□□□ 0.07
YBX1P67809 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
YBX1P67809 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.51■□□□□ 0.07
YBX1P67809 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.51■□□□□ 0.07
YBX1P67809 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
YBX1P67809 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.51■□□□□ 0.07
YBX1P67809 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
YBX1P67809 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
YBX1P67809 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
YBX1P67809 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
YBX1P67809 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.51■□□□□ 0.07
YBX1P67809 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.51■□□□□ 0.07
YBX1P67809 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
YBX1P67809 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
YBX1P67809 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
YBX1P67809 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
YBX1P67809 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
YBX1P67809 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
YBX1P67809 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
YBX1P67809 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
YBX1P67809 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
YBX1P67809 MIR648-201ENST00000385046 94 ntBASIC15.51■□□□□ 0.07
YBX1P67809 HAUS4P1-201ENST00000406739 1145 ntBASIC15.51■□□□□ 0.07
YBX1P67809 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
YBX1P67809 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.51■□□□□ 0.07
YBX1P67809 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.51■□□□□ 0.07
YBX1P67809 AC092580.3-201ENST00000430932 139 ntBASIC15.51■□□□□ 0.07
YBX1P67809 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
YBX1P67809 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.51■□□□□ 0.07
YBX1P67809 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
YBX1P67809 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.51■□□□□ 0.07
YBX1P67809 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
YBX1P67809 SPDYE12P-201ENST00000618416 771 ntBASIC15.51■□□□□ 0.07
YBX1P67809 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
YBX1P67809 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
YBX1P67809 AC023157.3-201ENST00000619086 2088 ntBASIC15.51■□□□□ 0.07
YBX1P67809 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
YBX1P67809 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.51■□□□□ 0.07
YBX1P67809 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.51■□□□□ 0.07
YBX1P67809 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms