Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16■□□□□ 0.15
AP1S1P61966 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16■□□□□ 0.15
AP1S1P61966 RPL13P2-201ENST00000440687 659 ntBASIC16■□□□□ 0.15
AP1S1P61966 USP40-206ENST00000443711 628 ntTSL 2 BASIC16■□□□□ 0.15
AP1S1P61966 TSPY16P-201ENST00000449843 468 ntBASIC16■□□□□ 0.15
AP1S1P61966 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
AP1S1P61966 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 SLED1-202ENST00000512051 380 ntBASIC16■□□□□ 0.15
AP1S1P61966 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16■□□□□ 0.15
AP1S1P61966 AC092337.1-201ENST00000568699 1129 ntBASIC16■□□□□ 0.15
AP1S1P61966 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
AP1S1P61966 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
AP1S1P61966 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16■□□□□ 0.15
AP1S1P61966 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16■□□□□ 0.15
AP1S1P61966 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16■□□□□ 0.15
AP1S1P61966 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP1S1P61966 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16■□□□□ 0.15
AP1S1P61966 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
AP1S1P61966 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP1S1P61966 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.99■□□□□ 0.15
AP1S1P61966 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP1S1P61966 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP1S1P61966 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.99■□□□□ 0.15
AP1S1P61966 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
AP1S1P61966 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.99■□□□□ 0.15
AP1S1P61966 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP1S1P61966 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP1S1P61966 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.99■□□□□ 0.15
AP1S1P61966 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP1S1P61966 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
AP1S1P61966 FAM8A3P-201ENST00000427218 844 ntBASIC15.99■□□□□ 0.15
AP1S1P61966 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.99■□□□□ 0.15
AP1S1P61966 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP1S1P61966 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.99■□□□□ 0.15
AP1S1P61966 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
AP1S1P61966 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP1S1P61966 MIR4745-201ENST00000577608 62 ntBASIC15.99■□□□□ 0.15
AP1S1P61966 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.99■□□□□ 0.15
AP1S1P61966 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.99■□□□□ 0.15
AP1S1P61966 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.99■□□□□ 0.15
AP1S1P61966 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.99■□□□□ 0.15
AP1S1P61966 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.99■□□□□ 0.15
AP1S1P61966 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
AP1S1P61966 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
AP1S1P61966 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP1S1P61966 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.99■□□□□ 0.15
AP1S1P61966 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP1S1P61966 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
AP1S1P61966 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
AP1S1P61966 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP1S1P61966 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP1S1P61966 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.99■□□□□ 0.15
AP1S1P61966 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.99■□□□□ 0.15
AP1S1P61966 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
AP1S1P61966 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
AP1S1P61966 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP1S1P61966 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP1S1P61966 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
AP1S1P61966 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.98■□□□□ 0.15
AP1S1P61966 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S1P61966 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
AP1S1P61966 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
AP1S1P61966 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.98■□□□□ 0.15
AP1S1P61966 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
AP1S1P61966 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
AP1S1P61966 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S1P61966 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
AP1S1P61966 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S1P61966 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S1P61966 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.98■□□□□ 0.15
AP1S1P61966 AC015922.1-201ENST00000421102 1152 ntBASIC15.98■□□□□ 0.15
AP1S1P61966 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.98■□□□□ 0.15
AP1S1P61966 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.98■□□□□ 0.15
AP1S1P61966 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.98■□□□□ 0.15
AP1S1P61966 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.98■□□□□ 0.15
AP1S1P61966 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S1P61966 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S1P61966 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S1P61966 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.98■□□□□ 0.15
AP1S1P61966 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.98■□□□□ 0.15
AP1S1P61966 TIMM17BP1-201ENST00000545713 516 ntBASIC15.98■□□□□ 0.15
AP1S1P61966 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.98■□□□□ 0.15
AP1S1P61966 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.98■□□□□ 0.15
AP1S1P61966 AC018695.7-201ENST00000624587 2492 ntBASIC15.98■□□□□ 0.15
AP1S1P61966 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.98■□□□□ 0.15
AP1S1P61966 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S1P61966 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S1P61966 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.98■□□□□ 0.15
AP1S1P61966 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.98■□□□□ 0.15
AP1S1P61966 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S1P61966 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S1P61966 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S1P61966 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S1P61966 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S1P61966 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S1P61966 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP1S1P61966 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP1S1P61966 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms