Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RPS3AP61247 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RPS3AP61247 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RPS3AP61247 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPS3AP61247 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
RPS3AP61247 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.02■□□□□ -0
RPS3AP61247 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPS3AP61247 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.02■□□□□ -0
RPS3AP61247 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPS3AP61247 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RPS3AP61247 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.02■□□□□ -0
RPS3AP61247 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
RPS3AP61247 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.02■□□□□ -0
RPS3AP61247 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.02■□□□□ -0
RPS3AP61247 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RPS3AP61247 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.02■□□□□ -0
RPS3AP61247 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.02■□□□□ -0
RPS3AP61247 SNHG9-202ENST00000564014 471 ntBASIC15.02■□□□□ -0
RPS3AP61247 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.02■□□□□ -0
RPS3AP61247 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.02■□□□□ -0
RPS3AP61247 AC021097.1-201ENST00000607902 574 ntBASIC15.02■□□□□ -0
RPS3AP61247 AC134684.3-201ENST00000641758 218 ntBASIC15.02■□□□□ -0
RPS3AP61247 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RPS3AP61247 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPS3AP61247 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RPS3AP61247 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
RPS3AP61247 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RPS3AP61247 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPS3AP61247 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RPS3AP61247 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPS3AP61247 LINC00895-201ENST00000629028 1637 ntBASIC15.02□□□□□ -0.01
RPS3AP61247 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPS3AP61247 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.02□□□□□ -0.01
RPS3AP61247 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPS3AP61247 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPS3AP61247 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.02□□□□□ -0.01
RPS3AP61247 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RPS3AP61247 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RPS3AP61247 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.02□□□□□ -0.01
RPS3AP61247 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RPS3AP61247 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RPS3AP61247 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RPS3AP61247 AP005117.1-202ENST00000581724 1908 ntBASIC15.02□□□□□ -0.01
RPS3AP61247 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RPS3AP61247 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.01□□□□□ -0.01
RPS3AP61247 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
RPS3AP61247 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RPS3AP61247 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
RPS3AP61247 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.01□□□□□ -0.01
RPS3AP61247 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.01□□□□□ -0.01
RPS3AP61247 AC254562.1-201ENST00000417586 456 ntBASIC15.01□□□□□ -0.01
RPS3AP61247 RPS8P6-201ENST00000426177 609 ntBASIC15.01□□□□□ -0.01
RPS3AP61247 AL671277.1-201ENST00000429656 993 ntBASIC15.01□□□□□ -0.01
RPS3AP61247 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RPS3AP61247 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.01□□□□□ -0.01
RPS3AP61247 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.01□□□□□ -0.01
RPS3AP61247 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.01□□□□□ -0.01
RPS3AP61247 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.01□□□□□ -0.01
RPS3AP61247 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.01□□□□□ -0.01
RPS3AP61247 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.01□□□□□ -0.01
RPS3AP61247 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.01□□□□□ -0.01
RPS3AP61247 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.01□□□□□ -0.01
RPS3AP61247 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.01□□□□□ -0.01
RPS3AP61247 AC055717.3-201ENST00000622967 595 ntBASIC15.01□□□□□ -0.01
RPS3AP61247 AC092902.6-201ENST00000641783 218 ntBASIC15.01□□□□□ -0.01
RPS3AP61247 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RPS3AP61247 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
RPS3AP61247 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RPS3AP61247 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RPS3AP61247 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.01□□□□□ -0.01
RPS3AP61247 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.01□□□□□ -0.01
RPS3AP61247 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.01□□□□□ -0.01
RPS3AP61247 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPS3AP61247 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RPS3AP61247 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms