Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC11.27□□□□□ -0.61
CKS1BP61024 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC11.27□□□□□ -0.61
CKS1BP61024 BX276092.5-203ENST00000456199 560 ntBASIC11.27□□□□□ -0.61
CKS1BP61024 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.27□□□□□ -0.61
CKS1BP61024 AC011467.2-201ENST00000598425 242 ntBASIC11.27□□□□□ -0.61
CKS1BP61024 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC11.27□□□□□ -0.61
CKS1BP61024 AC083849.1-201ENST00000615227 514 ntBASIC11.27□□□□□ -0.61
CKS1BP61024 AD001527.2-201ENST00000622994 785 ntBASIC11.27□□□□□ -0.61
CKS1BP61024 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.27□□□□□ -0.61
CKS1BP61024 ABBA01031661.1-201ENST00000634362 1253 ntBASIC11.27□□□□□ -0.61
CKS1BP61024 AC097493.4-201ENST00000641197 219 ntBASIC11.27□□□□□ -0.61
CKS1BP61024 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
CKS1BP61024 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC11.27□□□□□ -0.61
CKS1BP61024 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC11.27□□□□□ -0.61
CKS1BP61024 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CKS1BP61024 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CKS1BP61024 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 AC097637.2-201ENST00000624096 1997 ntBASIC11.27□□□□□ -0.61
CKS1BP61024 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CKS1BP61024 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CKS1BP61024 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
CKS1BP61024 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.26□□□□□ -0.61
CKS1BP61024 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
CKS1BP61024 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC11.26□□□□□ -0.61
CKS1BP61024 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CKS1BP61024 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.26□□□□□ -0.61
CKS1BP61024 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11.26□□□□□ -0.61
CKS1BP61024 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CKS1BP61024 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CKS1BP61024 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
CKS1BP61024 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
CKS1BP61024 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC11.26□□□□□ -0.61
CKS1BP61024 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CKS1BP61024 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.26□□□□□ -0.61
CKS1BP61024 AC063952.2-201ENST00000498792 1227 ntBASIC11.26□□□□□ -0.61
CKS1BP61024 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC11.26□□□□□ -0.61
CKS1BP61024 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC11.26□□□□□ -0.61
CKS1BP61024 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC11.26□□□□□ -0.61
CKS1BP61024 Z69720.1-201ENST00000601483 472 ntBASIC11.26□□□□□ -0.61
CKS1BP61024 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC11.26□□□□□ -0.61
CKS1BP61024 LINC00895-201ENST00000629028 1637 ntBASIC11.26□□□□□ -0.61
CKS1BP61024 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.26□□□□□ -0.61
CKS1BP61024 ME2P1-201ENST00000426028 1970 ntBASIC11.26□□□□□ -0.61
CKS1BP61024 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
CKS1BP61024 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC11.26□□□□□ -0.61
CKS1BP61024 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
CKS1BP61024 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CKS1BP61024 TP73-AS1-210ENST00000637775 1455 ntBASIC11.25□□□□□ -0.61
CKS1BP61024 TCAF1P1-201ENST00000414990 2232 ntBASIC11.25□□□□□ -0.61
CKS1BP61024 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
CKS1BP61024 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS1BP61024 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms