Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB5BP61020 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
RAB5BP61020 AC126365.1-201ENST00000578585 1514 ntBASIC12.47□□□□□ -0.41
RAB5BP61020 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
RAB5BP61020 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RAB5BP61020 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 AC106818.1-201ENST00000623223 3242 ntBASIC12.47□□□□□ -0.41
RAB5BP61020 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB5BP61020 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RAB5BP61020 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
RAB5BP61020 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
RAB5BP61020 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB5BP61020 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB5BP61020 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 NIFKP9-201ENST00000419265 221 ntBASIC12.47□□□□□ -0.41
RAB5BP61020 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.47□□□□□ -0.41
RAB5BP61020 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB5BP61020 BET1L-207ENST00000529614 560 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB5BP61020 AC104390.1-201ENST00000555663 520 ntBASIC12.47□□□□□ -0.41
RAB5BP61020 AC026271.3-201ENST00000571884 352 ntBASIC12.47□□□□□ -0.41
RAB5BP61020 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC12.47□□□□□ -0.41
RAB5BP61020 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB5BP61020 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
RAB5BP61020 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
RAB5BP61020 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB5BP61020 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
RAB5BP61020 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB5BP61020 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB5BP61020 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB5BP61020 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB5BP61020 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.47□□□□□ -0.41
RAB5BP61020 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RAB5BP61020 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5BP61020 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB5BP61020 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
RAB5BP61020 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
RAB5BP61020 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
RAB5BP61020 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB5BP61020 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.46□□□□□ -0.41
RAB5BP61020 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.46□□□□□ -0.41
RAB5BP61020 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB5BP61020 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB5BP61020 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.46□□□□□ -0.41
RAB5BP61020 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
RAB5BP61020 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
RAB5BP61020 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB5BP61020 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.46□□□□□ -0.41
RAB5BP61020 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 AC152010.1-201ENST00000415779 2006 ntBASIC12.46□□□□□ -0.41
RAB5BP61020 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB5BP61020 ID1-201ENST00000376105 1233 ntBASIC12.46□□□□□ -0.41
RAB5BP61020 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
RAB5BP61020 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.46□□□□□ -0.41
RAB5BP61020 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
RAB5BP61020 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5BP61020 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.46□□□□□ -0.41
RAB5BP61020 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
RAB5BP61020 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
RAB5BP61020 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RAB5BP61020 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB5BP61020 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.42
RAB5BP61020 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.46□□□□□ -0.42
RAB5BP61020 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.46□□□□□ -0.42
RAB5BP61020 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms