Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIPPLY3P57055 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIPPLY3P57055 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIPPLY3P57055 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIPPLY3P57055 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.28□□□□□ -0.28
RIPPLY3P57055 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
RIPPLY3P57055 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.27□□□□□ -0.28
RIPPLY3P57055 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.27□□□□□ -0.28
RIPPLY3P57055 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RIPPLY3P57055 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RIPPLY3P57055 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.28
RIPPLY3P57055 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RIPPLY3P57055 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.27□□□□□ -0.28
RIPPLY3P57055 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.27□□□□□ -0.28
RIPPLY3P57055 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.27□□□□□ -0.28
RIPPLY3P57055 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.27□□□□□ -0.28
RIPPLY3P57055 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RIPPLY3P57055 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RIPPLY3P57055 AL499627.1-201ENST00000569373 2188 ntBASIC13.27□□□□□ -0.28
RIPPLY3P57055 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RIPPLY3P57055 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIPPLY3P57055 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIPPLY3P57055 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIPPLY3P57055 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIPPLY3P57055 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RIPPLY3P57055 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIPPLY3P57055 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 AC135983.4-201ENST00000564116 1262 ntBASIC13.27□□□□□ -0.29
RIPPLY3P57055 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 AL033527.5-202ENST00000641632 1098 ntBASIC13.27□□□□□ -0.29
RIPPLY3P57055 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RIPPLY3P57055 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIPPLY3P57055 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIPPLY3P57055 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIPPLY3P57055 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIPPLY3P57055 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIPPLY3P57055 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.27□□□□□ -0.29
RIPPLY3P57055 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RIPPLY3P57055 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RIPPLY3P57055 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RIPPLY3P57055 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RIPPLY3P57055 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.26□□□□□ -0.29
RIPPLY3P57055 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
RIPPLY3P57055 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
RIPPLY3P57055 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.26□□□□□ -0.29
RIPPLY3P57055 CYP51A1P3-201ENST00000400072 1428 ntBASIC13.26□□□□□ -0.29
RIPPLY3P57055 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RIPPLY3P57055 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.26□□□□□ -0.29
RIPPLY3P57055 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 AL442647.2-201ENST00000429864 857 ntBASIC13.26□□□□□ -0.29
RIPPLY3P57055 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 AC098935.1-201ENST00000446057 611 ntBASIC13.26□□□□□ -0.29
RIPPLY3P57055 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIPPLY3P57055 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.26□□□□□ -0.29
RIPPLY3P57055 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.26□□□□□ -0.29
RIPPLY3P57055 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.26□□□□□ -0.29
RIPPLY3P57055 NSD1-211ENST00000511258 809 ntTSL 3 BASIC13.26□□□□□ -0.29
RIPPLY3P57055 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
RIPPLY3P57055 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms