Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN20P56880 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CLDN20P56880 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
CLDN20P56880 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CLDN20P56880 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN20P56880 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
CLDN20P56880 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN20P56880 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CLDN20P56880 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CLDN20P56880 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN20P56880 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.65□□□□□ -0.06
CLDN20P56880 KLF2P3-201ENST00000451977 1087 ntBASIC14.65□□□□□ -0.06
CLDN20P56880 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN20P56880 AC125807.1-201ENST00000483097 614 ntBASIC14.65□□□□□ -0.06
CLDN20P56880 AC067863.1-201ENST00000494933 530 ntBASIC14.65□□□□□ -0.06
CLDN20P56880 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN20P56880 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.65□□□□□ -0.06
CLDN20P56880 DUX4L27-201ENST00000554796 1261 ntBASIC14.65□□□□□ -0.06
CLDN20P56880 AC051619.7-201ENST00000568314 623 ntBASIC14.65□□□□□ -0.06
CLDN20P56880 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 AL596087.1-201ENST00000400979 1969 ntBASIC14.65□□□□□ -0.06
CLDN20P56880 CICP13-201ENST00000422015 2789 ntBASIC14.65□□□□□ -0.06
CLDN20P56880 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CLDN20P56880 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.65□□□□□ -0.06
CLDN20P56880 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN20P56880 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CLDN20P56880 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN20P56880 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN20P56880 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.64□□□□□ -0.07
CLDN20P56880 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
CLDN20P56880 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CLDN20P56880 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CLDN20P56880 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 AC138035.3-201ENST00000622706 2791 ntBASIC14.64□□□□□ -0.07
CLDN20P56880 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.64□□□□□ -0.07
CLDN20P56880 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CLDN20P56880 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.64□□□□□ -0.07
CLDN20P56880 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.64□□□□□ -0.07
CLDN20P56880 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.64□□□□□ -0.07
CLDN20P56880 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.64□□□□□ -0.07
CLDN20P56880 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.64□□□□□ -0.07
CLDN20P56880 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.64□□□□□ -0.07
CLDN20P56880 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.64□□□□□ -0.07
CLDN20P56880 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.64□□□□□ -0.07
CLDN20P56880 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CLDN20P56880 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.64□□□□□ -0.07
CLDN20P56880 AC061975.2-201ENST00000581722 295 ntBASIC14.64□□□□□ -0.07
CLDN20P56880 AL355385.1-201ENST00000606123 409 ntBASIC14.64□□□□□ -0.07
CLDN20P56880 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.64□□□□□ -0.07
CLDN20P56880 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CLDN20P56880 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CLDN20P56880 AC010491.1-201ENST00000563101 2797 ntBASIC14.64□□□□□ -0.07
CLDN20P56880 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.64□□□□□ -0.07
CLDN20P56880 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.64□□□□□ -0.07
CLDN20P56880 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN20P56880 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN20P56880 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms