Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PER3P56645 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PER3P56645 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.83□□□□□ -0.04
PER3P56645 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PER3P56645 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PER3P56645 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.83□□□□□ -0.04
PER3P56645 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
PER3P56645 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PER3P56645 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
PER3P56645 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PER3P56645 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
PER3P56645 AP006294.1-201ENST00000415407 339 ntBASIC14.82□□□□□ -0.04
PER3P56645 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.82□□□□□ -0.04
PER3P56645 AC022494.1-201ENST00000466044 728 ntBASIC14.82□□□□□ -0.04
PER3P56645 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.82□□□□□ -0.04
PER3P56645 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PER3P56645 MIR6799-201ENST00000620297 69 ntBASIC14.82□□□□□ -0.04
PER3P56645 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.82□□□□□ -0.04
PER3P56645 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.82□□□□□ -0.04
PER3P56645 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.82□□□□□ -0.04
PER3P56645 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PER3P56645 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PER3P56645 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 AC092053.1-201ENST00000605787 1936 ntBASIC14.82□□□□□ -0.04
PER3P56645 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.82□□□□□ -0.04
PER3P56645 AC007541.1-201ENST00000570282 1469 ntBASIC14.82□□□□□ -0.04
PER3P56645 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.82□□□□□ -0.04
PER3P56645 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PER3P56645 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PER3P56645 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.81□□□□□ -0.04
PER3P56645 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PER3P56645 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.81□□□□□ -0.04
PER3P56645 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
PER3P56645 FAM45BP-202ENST00000592932 1624 ntBASIC14.81□□□□□ -0.04
PER3P56645 CETN4P-206ENST00000642099 2168 ntBASIC14.81□□□□□ -0.04
PER3P56645 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PER3P56645 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PER3P56645 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PER3P56645 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PER3P56645 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.81□□□□□ -0.04
PER3P56645 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.81□□□□□ -0.04
PER3P56645 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.81□□□□□ -0.04
PER3P56645 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.81□□□□□ -0.04
PER3P56645 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PER3P56645 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PER3P56645 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.81□□□□□ -0.04
PER3P56645 GIMAP3P-201ENST00000495150 836 ntBASIC14.81□□□□□ -0.04
PER3P56645 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PER3P56645 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.81□□□□□ -0.04
PER3P56645 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.81□□□□□ -0.04
PER3P56645 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.81□□□□□ -0.04
PER3P56645 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.81□□□□□ -0.04
PER3P56645 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PER3P56645 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.81□□□□□ -0.04
PER3P56645 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PER3P56645 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PER3P56645 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PER3P56645 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PER3P56645 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PER3P56645 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PER3P56645 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PER3P56645 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.81□□□□□ -0.04
PER3P56645 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PER3P56645 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PER3P56645 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PER3P56645 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PER3P56645 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.81□□□□□ -0.04
PER3P56645 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PER3P56645 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PER3P56645 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.8□□□□□ -0.04
PER3P56645 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.8□□□□□ -0.04
PER3P56645 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PER3P56645 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PER3P56645 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PER3P56645 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.8□□□□□ -0.04
PER3P56645 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.8□□□□□ -0.04
PER3P56645 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PER3P56645 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms