Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.14■□□□□ 0.01
GFERP55789 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.14■□□□□ 0.01
GFERP55789 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
GFERP55789 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
GFERP55789 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.14■□□□□ 0.01
GFERP55789 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
GFERP55789 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
GFERP55789 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.14■□□□□ 0.01
GFERP55789 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 AL442647.2-201ENST00000429864 857 ntBASIC15.14■□□□□ 0.01
GFERP55789 AC007389.4-201ENST00000454674 793 ntBASIC15.14■□□□□ 0.01
GFERP55789 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.14■□□□□ 0.01
GFERP55789 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.14■□□□□ 0.01
GFERP55789 KRT17P8-201ENST00000540749 863 ntBASIC15.14■□□□□ 0.01
GFERP55789 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.14■□□□□ 0.01
GFERP55789 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.14■□□□□ 0.01
GFERP55789 AL359711.2-201ENST00000563105 872 ntBASIC15.14■□□□□ 0.01
GFERP55789 BRI3BPP1-201ENST00000594224 787 ntBASIC15.14■□□□□ 0.01
GFERP55789 AC010319.3-201ENST00000597028 470 ntBASIC15.14■□□□□ 0.01
GFERP55789 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.14■□□□□ 0.01
GFERP55789 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
GFERP55789 AL162274.1-201ENST00000617191 1098 ntBASIC15.14■□□□□ 0.01
GFERP55789 RPSAP52-203ENST00000622976 1023 ntBASIC15.14■□□□□ 0.01
GFERP55789 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.14■□□□□ 0.01
GFERP55789 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.14■□□□□ 0.01
GFERP55789 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFERP55789 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
GFERP55789 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFERP55789 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GFERP55789 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GFERP55789 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.13■□□□□ 0.01
GFERP55789 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GFERP55789 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.13■□□□□ 0.01
GFERP55789 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.13■□□□□ 0.01
GFERP55789 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GFERP55789 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.13■□□□□ 0.01
GFERP55789 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.13■□□□□ 0.01
GFERP55789 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
GFERP55789 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GFERP55789 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
GFERP55789 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GFERP55789 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GFERP55789 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFERP55789 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFERP55789 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.13■□□□□ 0.01
GFERP55789 AC007274.1-201ENST00000439805 662 ntBASIC15.13■□□□□ 0.01
GFERP55789 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.13■□□□□ 0.01
GFERP55789 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
GFERP55789 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GFERP55789 ACA64.2-201ENST00000459014 129 ntBASIC15.13■□□□□ 0.01
GFERP55789 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.13■□□□□ 0.01
GFERP55789 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
GFERP55789 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.13■□□□□ 0.01
GFERP55789 AC069224.1-201ENST00000566372 1715 ntBASIC15.13■□□□□ 0.01
GFERP55789 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.13■□□□□ 0.01
GFERP55789 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.13■□□□□ 0.01
GFERP55789 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
GFERP55789 AC008735.3-201ENST00000596646 500 ntBASIC15.13■□□□□ 0.01
GFERP55789 AP003680.1-201ENST00000598970 3660 ntBASIC15.13■□□□□ 0.01
GFERP55789 AL359881.2-201ENST00000602973 570 ntBASIC15.13■□□□□ 0.01
GFERP55789 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.13■□□□□ 0.01
GFERP55789 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GFERP55789 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFERP55789 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFERP55789 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.13■□□□□ 0.01
GFERP55789 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GFERP55789 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.13■□□□□ 0.01
GFERP55789 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFERP55789 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFERP55789 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
GFERP55789 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GFERP55789 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFERP55789 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.13■□□□□ 0.01
GFERP55789 AC084018.2-201ENST00000613093 2607 ntBASIC15.13■□□□□ 0.01
GFERP55789 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GFERP55789 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
GFERP55789 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
GFERP55789 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms