Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.62■□□□□ 0.09
CDH13P55290 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 TFAMP1-201ENST00000412727 736 ntBASIC15.62■□□□□ 0.09
CDH13P55290 AL355306.1-201ENST00000415580 579 ntBASIC15.62■□□□□ 0.09
CDH13P55290 AC023274.1-201ENST00000418278 595 ntBASIC15.62■□□□□ 0.09
CDH13P55290 AL591424.1-201ENST00000442569 1213 ntBASIC15.62■□□□□ 0.09
CDH13P55290 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
CDH13P55290 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH13P55290 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.62■□□□□ 0.09
CDH13P55290 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH13P55290 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH13P55290 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
CDH13P55290 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH13P55290 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH13P55290 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CDH13P55290 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CDH13P55290 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.62■□□□□ 0.09
CDH13P55290 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CDH13P55290 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH13P55290 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CDH13P55290 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH13P55290 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH13P55290 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CDH13P55290 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH13P55290 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH13P55290 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.61■□□□□ 0.09
CDH13P55290 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.61■□□□□ 0.09
CDH13P55290 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CDH13P55290 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CDH13P55290 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
CDH13P55290 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH13P55290 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CDH13P55290 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.61■□□□□ 0.09
CDH13P55290 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.61■□□□□ 0.09
CDH13P55290 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH13P55290 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.61■□□□□ 0.09
CDH13P55290 AC024267.1-201ENST00000582320 895 ntBASIC15.61■□□□□ 0.09
CDH13P55290 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH13P55290 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.61■□□□□ 0.09
CDH13P55290 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.61■□□□□ 0.09
CDH13P55290 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.61■□□□□ 0.09
CDH13P55290 FAM197Y3-203ENST00000618346 717 ntBASIC15.61■□□□□ 0.09
CDH13P55290 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.61■□□□□ 0.09
CDH13P55290 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.61■□□□□ 0.09
CDH13P55290 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.61■□□□□ 0.09
CDH13P55290 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CDH13P55290 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.61■□□□□ 0.09
CDH13P55290 AKAP8P1-201ENST00000434743 1349 ntBASIC15.61■□□□□ 0.09
CDH13P55290 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH13P55290 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CDH13P55290 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH13P55290 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CDH13P55290 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH13P55290 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH13P55290 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CDH13P55290 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CDH13P55290 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CDH13P55290 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CDH13P55290 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH13P55290 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH13P55290 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH13P55290 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.6■□□□□ 0.09
CDH13P55290 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CDH13P55290 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms