Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 SPTLC1P1-201ENST00000447199 261 ntBASIC17.36■□□□□ 0.37
NCKAP1LP55160 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 RN7SL204P-201ENST00000582831 262 ntBASIC17.36■□□□□ 0.37
NCKAP1LP55160 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 AC009118.2-201ENST00000613275 655 ntBASIC17.36■□□□□ 0.37
NCKAP1LP55160 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.36■□□□□ 0.37
NCKAP1LP55160 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NCKAP1LP55160 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCKAP1LP55160 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
NCKAP1LP55160 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NCKAP1LP55160 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKAP1LP55160 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKAP1LP55160 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NCKAP1LP55160 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKAP1LP55160 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKAP1LP55160 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKAP1LP55160 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NCKAP1LP55160 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.35■□□□□ 0.37
NCKAP1LP55160 AC002472.2-201ENST00000442739 958 ntBASIC17.35■□□□□ 0.37
NCKAP1LP55160 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NCKAP1LP55160 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.35■□□□□ 0.37
NCKAP1LP55160 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKAP1LP55160 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKAP1LP55160 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
NCKAP1LP55160 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.35■□□□□ 0.37
NCKAP1LP55160 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKAP1LP55160 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
NCKAP1LP55160 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKAP1LP55160 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKAP1LP55160 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.35■□□□□ 0.37
NCKAP1LP55160 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NCKAP1LP55160 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.35■□□□□ 0.37
NCKAP1LP55160 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKAP1LP55160 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NCKAP1LP55160 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NCKAP1LP55160 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKAP1LP55160 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKAP1LP55160 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NCKAP1LP55160 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCKAP1LP55160 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NCKAP1LP55160 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NCKAP1LP55160 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.34■□□□□ 0.37
NCKAP1LP55160 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 PRAL-201ENST00000624952 3286 ntBASIC17.34■□□□□ 0.37
NCKAP1LP55160 AP003680.1-201ENST00000598970 3660 ntBASIC17.34■□□□□ 0.37
NCKAP1LP55160 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.34■□□□□ 0.37
NCKAP1LP55160 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
NCKAP1LP55160 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.34■□□□□ 0.37
NCKAP1LP55160 CICP13-201ENST00000422015 2789 ntBASIC17.34■□□□□ 0.37
NCKAP1LP55160 CROCCP1-201ENST00000426910 5675 ntBASIC17.34■□□□□ 0.37
NCKAP1LP55160 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NCKAP1LP55160 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.34■□□□□ 0.37
NCKAP1LP55160 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NCKAP1LP55160 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NCKAP1LP55160 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.34■□□□□ 0.37
NCKAP1LP55160 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
NCKAP1LP55160 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NCKAP1LP55160 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
NCKAP1LP55160 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.34■□□□□ 0.37
NCKAP1LP55160 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCKAP1LP55160 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms