Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.9□□□□□ -0.18
ATP1B3P54709 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ATP1B3P54709 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ATP1B3P54709 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ATP1B3P54709 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ATP1B3P54709 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.9□□□□□ -0.18
ATP1B3P54709 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.9□□□□□ -0.19
ATP1B3P54709 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
ATP1B3P54709 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
ATP1B3P54709 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.9□□□□□ -0.19
ATP1B3P54709 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ATP1B3P54709 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ATP1B3P54709 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.89□□□□□ -0.19
ATP1B3P54709 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ATP1B3P54709 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.89□□□□□ -0.19
ATP1B3P54709 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.89□□□□□ -0.19
ATP1B3P54709 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
ATP1B3P54709 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.89□□□□□ -0.19
ATP1B3P54709 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.89□□□□□ -0.19
ATP1B3P54709 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.89□□□□□ -0.19
ATP1B3P54709 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.89□□□□□ -0.19
ATP1B3P54709 MYO15B-237ENST00000642007 4893 ntBASIC13.89□□□□□ -0.19
ATP1B3P54709 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.89□□□□□ -0.19
ATP1B3P54709 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.89□□□□□ -0.19
ATP1B3P54709 AC002056.1-201ENST00000395613 760 ntBASIC13.89□□□□□ -0.19
ATP1B3P54709 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
ATP1B3P54709 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.89□□□□□ -0.19
ATP1B3P54709 AC074386.1-202ENST00000463561 864 ntBASIC13.89□□□□□ -0.19
ATP1B3P54709 PRYP6-201ENST00000514804 343 ntBASIC13.89□□□□□ -0.19
ATP1B3P54709 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.89□□□□□ -0.19
ATP1B3P54709 AC034105.1-201ENST00000563488 319 ntBASIC13.89□□□□□ -0.19
ATP1B3P54709 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
ATP1B3P54709 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.89□□□□□ -0.19
ATP1B3P54709 AC068137.2-201ENST00000605408 478 ntBASIC13.89□□□□□ -0.19
ATP1B3P54709 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.89□□□□□ -0.19
ATP1B3P54709 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.89□□□□□ -0.19
ATP1B3P54709 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.89□□□□□ -0.19
ATP1B3P54709 AL589702.1-201ENST00000641229 1509 ntBASIC13.89□□□□□ -0.19
ATP1B3P54709 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.89□□□□□ -0.19
ATP1B3P54709 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.89□□□□□ -0.19
ATP1B3P54709 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ATP1B3P54709 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATP1B3P54709 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATP1B3P54709 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATP1B3P54709 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATP1B3P54709 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
ATP1B3P54709 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.88□□□□□ -0.19
ATP1B3P54709 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ATP1B3P54709 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
ATP1B3P54709 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ATP1B3P54709 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATP1B3P54709 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATP1B3P54709 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATP1B3P54709 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
ATP1B3P54709 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATP1B3P54709 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATP1B3P54709 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATP1B3P54709 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATP1B3P54709 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATP1B3P54709 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.88□□□□□ -0.19
ATP1B3P54709 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.88□□□□□ -0.19
ATP1B3P54709 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
ATP1B3P54709 AC007967.2-201ENST00000432613 625 ntBASIC13.88□□□□□ -0.19
ATP1B3P54709 RPL13AP23-201ENST00000480739 586 ntBASIC13.88□□□□□ -0.19
ATP1B3P54709 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.88□□□□□ -0.19
ATP1B3P54709 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ATP1B3P54709 AC112191.1-201ENST00000523689 701 ntBASIC13.88□□□□□ -0.19
ATP1B3P54709 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ATP1B3P54709 AC002347.1-201ENST00000569543 541 ntBASIC13.88□□□□□ -0.19
ATP1B3P54709 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.88□□□□□ -0.19
ATP1B3P54709 MIR4321-201ENST00000592276 80 ntBASIC13.88□□□□□ -0.19
ATP1B3P54709 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATP1B3P54709 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.88□□□□□ -0.19
ATP1B3P54709 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.88□□□□□ -0.19
ATP1B3P54709 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
ATP1B3P54709 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATP1B3P54709 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.88□□□□□ -0.19
ATP1B3P54709 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ATP1B3P54709 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.88□□□□□ -0.19
ATP1B3P54709 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATP1B3P54709 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.88□□□□□ -0.19
ATP1B3P54709 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms