Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.9■□□□□ 0.3
CACNA2D1P54289 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA2D1P54289 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CACNA2D1P54289 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CACNA2D1P54289 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CACNA2D1P54289 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CACNA2D1P54289 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA2D1P54289 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA2D1P54289 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA2D1P54289 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA2D1P54289 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA2D1P54289 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 TERF1P3-201ENST00000505638 1227 ntBASIC16.89■□□□□ 0.29
CACNA2D1P54289 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA2D1P54289 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA2D1P54289 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 AC025048.3-201ENST00000590609 569 ntBASIC16.89■□□□□ 0.29
CACNA2D1P54289 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA2D1P54289 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA2D1P54289 AC005702.4-201ENST00000618393 416 ntBASIC16.89■□□□□ 0.29
CACNA2D1P54289 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA2D1P54289 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA2D1P54289 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA2D1P54289 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA2D1P54289 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA2D1P54289 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA2D1P54289 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA2D1P54289 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA2D1P54289 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.29
CACNA2D1P54289 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA2D1P54289 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA2D1P54289 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA2D1P54289 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA2D1P54289 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA2D1P54289 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA2D1P54289 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA2D1P54289 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA2D1P54289 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 AL589987.1-201ENST00000453380 819 ntBASIC16.88■□□□□ 0.29
CACNA2D1P54289 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA2D1P54289 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 MIR6069-201ENST00000620069 79 ntBASIC16.88■□□□□ 0.29
CACNA2D1P54289 AC004461.2-201ENST00000629517 803 ntBASIC16.88■□□□□ 0.29
CACNA2D1P54289 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA2D1P54289 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA2D1P54289 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA2D1P54289 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA2D1P54289 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA2D1P54289 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA2D1P54289 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA2D1P54289 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CACNA2D1P54289 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA2D1P54289 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CACNA2D1P54289 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CACNA2D1P54289 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CACNA2D1P54289 AP001282.1-201ENST00000531301 1499 ntBASIC16.87■□□□□ 0.29
CACNA2D1P54289 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CACNA2D1P54289 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CACNA2D1P54289 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CACNA2D1P54289 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CACNA2D1P54289 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CACNA2D1P54289 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms