Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
LIMK2P53671 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
LIMK2P53671 KLF2P3-201ENST00000451977 1087 ntBASIC16.08■□□□□ 0.16
LIMK2P53671 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LIMK2P53671 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIMK2P53671 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LIMK2P53671 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LIMK2P53671 AC026150.2-201ENST00000564693 1156 ntBASIC16.08■□□□□ 0.16
LIMK2P53671 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.08■□□□□ 0.16
LIMK2P53671 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.08■□□□□ 0.16
LIMK2P53671 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LIMK2P53671 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.08■□□□□ 0.16
LIMK2P53671 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIMK2P53671 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.08■□□□□ 0.16
LIMK2P53671 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIMK2P53671 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIMK2P53671 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
LIMK2P53671 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LIMK2P53671 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LIMK2P53671 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIMK2P53671 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIMK2P53671 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIMK2P53671 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIMK2P53671 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.08■□□□□ 0.16
LIMK2P53671 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIMK2P53671 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LIMK2P53671 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LIMK2P53671 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LIMK2P53671 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LIMK2P53671 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LIMK2P53671 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIMK2P53671 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIMK2P53671 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIMK2P53671 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.07■□□□□ 0.16
LIMK2P53671 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LIMK2P53671 AC023157.3-201ENST00000619086 2088 ntBASIC16.07■□□□□ 0.16
LIMK2P53671 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.07■□□□□ 0.16
LIMK2P53671 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIMK2P53671 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.07■□□□□ 0.16
LIMK2P53671 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.07■□□□□ 0.16
LIMK2P53671 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LIMK2P53671 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.07■□□□□ 0.16
LIMK2P53671 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIMK2P53671 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.07■□□□□ 0.16
LIMK2P53671 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LIMK2P53671 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIMK2P53671 SPDYE7P-202ENST00000420373 878 ntBASIC16.07■□□□□ 0.16
LIMK2P53671 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.07■□□□□ 0.16
LIMK2P53671 AC055876.3-201ENST00000431496 288 ntBASIC16.07■□□□□ 0.16
LIMK2P53671 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.07■□□□□ 0.16
LIMK2P53671 SPDYE14P-201ENST00000442619 822 ntBASIC16.07■□□□□ 0.16
LIMK2P53671 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.07■□□□□ 0.16
LIMK2P53671 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LIMK2P53671 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LIMK2P53671 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.07■□□□□ 0.16
LIMK2P53671 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.07■□□□□ 0.16
LIMK2P53671 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.07■□□□□ 0.16
LIMK2P53671 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.07■□□□□ 0.16
LIMK2P53671 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.07■□□□□ 0.16
LIMK2P53671 AC027307.2-201ENST00000591252 911 ntBASIC16.07■□□□□ 0.16
LIMK2P53671 AC138649.4-201ENST00000612222 287 ntBASIC16.07■□□□□ 0.16
LIMK2P53671 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.07■□□□□ 0.16
LIMK2P53671 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LIMK2P53671 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LIMK2P53671 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.07■□□□□ 0.16
LIMK2P53671 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.07■□□□□ 0.16
LIMK2P53671 AC006058.4-201ENST00000624016 1670 ntBASIC16.07■□□□□ 0.16
LIMK2P53671 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIMK2P53671 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.07■□□□□ 0.16
LIMK2P53671 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIMK2P53671 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.07■□□□□ 0.16
LIMK2P53671 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LIMK2P53671 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIMK2P53671 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIMK2P53671 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LIMK2P53671 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LIMK2P53671 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIMK2P53671 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.06■□□□□ 0.16
LIMK2P53671 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIMK2P53671 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIMK2P53671 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.06■□□□□ 0.16
LIMK2P53671 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIMK2P53671 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.06■□□□□ 0.16
LIMK2P53671 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
LIMK2P53671 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LIMK2P53671 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.06■□□□□ 0.16
LIMK2P53671 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.06■□□□□ 0.16
LIMK2P53671 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LIMK2P53671 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIMK2P53671 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIMK2P53671 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LIMK2P53671 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIMK2P53671 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.06■□□□□ 0.16
LIMK2P53671 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LIMK2P53671 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LIMK2P53671 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
LIMK2P53671 AC093214.1-201ENST00000511688 1107 ntBASIC16.06■□□□□ 0.16
LIMK2P53671 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.06■□□□□ 0.16
LIMK2P53671 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
LIMK2P53671 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms