Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRP9P49458 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.21□□□□□ -0.13
SRP9P49458 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRP9P49458 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SRP9P49458 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SRP9P49458 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRP9P49458 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRP9P49458 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRP9P49458 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRP9P49458 AL161772.1-201ENST00000610494 4412 ntBASIC14.21□□□□□ -0.13
SRP9P49458 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRP9P49458 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRP9P49458 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRP9P49458 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SRP9P49458 HMGA1P7-201ENST00000406908 502 ntBASIC14.21□□□□□ -0.13
SRP9P49458 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
SRP9P49458 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.21□□□□□ -0.13
SRP9P49458 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SRP9P49458 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SRP9P49458 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRP9P49458 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.21□□□□□ -0.13
SRP9P49458 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.21□□□□□ -0.13
SRP9P49458 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.21□□□□□ -0.13
SRP9P49458 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.21□□□□□ -0.13
SRP9P49458 MTDHP5-201ENST00000598980 586 ntBASIC14.21□□□□□ -0.13
SRP9P49458 AL671883.3-201ENST00000603274 991 ntBASIC14.21□□□□□ -0.13
SRP9P49458 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SRP9P49458 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.21□□□□□ -0.13
SRP9P49458 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.21□□□□□ -0.13
SRP9P49458 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SRP9P49458 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRP9P49458 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRP9P49458 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SRP9P49458 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.14
SRP9P49458 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SRP9P49458 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
SRP9P49458 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.2□□□□□ -0.14
SRP9P49458 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SRP9P49458 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.2□□□□□ -0.14
SRP9P49458 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.2□□□□□ -0.14
SRP9P49458 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.2□□□□□ -0.14
SRP9P49458 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.2□□□□□ -0.14
SRP9P49458 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SRP9P49458 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.2□□□□□ -0.14
SRP9P49458 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.2□□□□□ -0.14
SRP9P49458 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.2□□□□□ -0.14
SRP9P49458 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.2□□□□□ -0.14
SRP9P49458 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.2□□□□□ -0.14
SRP9P49458 PMS2P4-201ENST00000412466 1052 ntBASIC14.2□□□□□ -0.14
SRP9P49458 AC004832.2-201ENST00000426397 482 ntBASIC14.2□□□□□ -0.14
SRP9P49458 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.2□□□□□ -0.14
SRP9P49458 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
SRP9P49458 DNAJB3-201ENST00000446806 729 ntBASIC14.2□□□□□ -0.14
SRP9P49458 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
SRP9P49458 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.2□□□□□ -0.14
SRP9P49458 PGAM5P1-201ENST00000518923 814 ntBASIC14.2□□□□□ -0.14
SRP9P49458 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.2□□□□□ -0.14
SRP9P49458 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.2□□□□□ -0.14
SRP9P49458 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.2□□□□□ -0.14
SRP9P49458 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.2□□□□□ -0.14
SRP9P49458 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.2□□□□□ -0.14
SRP9P49458 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.2□□□□□ -0.14
SRP9P49458 MIR3909-201ENST00000579518 119 ntBASIC14.2□□□□□ -0.14
SRP9P49458 AL031055.1-201ENST00000606362 631 ntBASIC14.2□□□□□ -0.14
SRP9P49458 AL513190.1-201ENST00000621254 727 ntBASIC14.2□□□□□ -0.14
SRP9P49458 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.2□□□□□ -0.14
SRP9P49458 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 KRT8P39-201ENST00000396270 1433 ntBASIC14.2□□□□□ -0.14
SRP9P49458 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.2□□□□□ -0.14
SRP9P49458 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SRP9P49458 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.2□□□□□ -0.14
SRP9P49458 AC020658.6-201ENST00000623564 1870 ntBASIC14.2□□□□□ -0.14
SRP9P49458 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SRP9P49458 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.2□□□□□ -0.14
SRP9P49458 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRP9P49458 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
SRP9P49458 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRP9P49458 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
SRP9P49458 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.19□□□□□ -0.14
SRP9P49458 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SRP9P49458 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms