Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.88■□□□□ 0.13
CSNK1DP48730 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1DP48730 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1DP48730 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1DP48730 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1DP48730 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.88■□□□□ 0.13
CSNK1DP48730 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1DP48730 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.88■□□□□ 0.13
CSNK1DP48730 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.88■□□□□ 0.13
CSNK1DP48730 CRB3P1-201ENST00000449338 276 ntBASIC15.88■□□□□ 0.13
CSNK1DP48730 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1DP48730 KRT18P43-201ENST00000469825 1281 ntBASIC15.88■□□□□ 0.13
CSNK1DP48730 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.88■□□□□ 0.13
CSNK1DP48730 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.88■□□□□ 0.13
CSNK1DP48730 API5-211ENST00000534695 560 ntTSL 5 BASIC15.88■□□□□ 0.13
CSNK1DP48730 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.88■□□□□ 0.13
CSNK1DP48730 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.88■□□□□ 0.13
CSNK1DP48730 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.88■□□□□ 0.13
CSNK1DP48730 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.88■□□□□ 0.13
CSNK1DP48730 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.88■□□□□ 0.13
CSNK1DP48730 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.88■□□□□ 0.13
CSNK1DP48730 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.88■□□□□ 0.13
CSNK1DP48730 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1DP48730 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1DP48730 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.88■□□□□ 0.13
CSNK1DP48730 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
CSNK1DP48730 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1DP48730 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CSNK1DP48730 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1DP48730 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1DP48730 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1DP48730 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CSNK1DP48730 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CSNK1DP48730 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.87■□□□□ 0.13
CSNK1DP48730 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1DP48730 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1DP48730 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.87■□□□□ 0.13
CSNK1DP48730 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CSNK1DP48730 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1DP48730 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1DP48730 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1DP48730 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.87■□□□□ 0.13
CSNK1DP48730 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.87■□□□□ 0.13
CSNK1DP48730 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CSNK1DP48730 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.87■□□□□ 0.13
CSNK1DP48730 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CSNK1DP48730 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1DP48730 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.87■□□□□ 0.13
CSNK1DP48730 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.87■□□□□ 0.13
CSNK1DP48730 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.87■□□□□ 0.13
CSNK1DP48730 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.87■□□□□ 0.13
CSNK1DP48730 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.87■□□□□ 0.13
CSNK1DP48730 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
CSNK1DP48730 AC015910.1-201ENST00000579400 975 ntBASIC15.87■□□□□ 0.13
CSNK1DP48730 SPDYE22P-201ENST00000582158 798 ntBASIC15.87■□□□□ 0.13
CSNK1DP48730 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CSNK1DP48730 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.87■□□□□ 0.13
CSNK1DP48730 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CSNK1DP48730 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1DP48730 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1DP48730 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1DP48730 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
CSNK1DP48730 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1DP48730 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1DP48730 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CSNK1DP48730 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1DP48730 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.87■□□□□ 0.13
CSNK1DP48730 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1DP48730 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1DP48730 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CSNK1DP48730 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.87■□□□□ 0.13
CSNK1DP48730 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSNK1DP48730 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1DP48730 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.86■□□□□ 0.13
CSNK1DP48730 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1DP48730 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1DP48730 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CSNK1DP48730 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
CSNK1DP48730 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1DP48730 AL121723.1-201ENST00000445194 1519 ntBASIC15.86■□□□□ 0.13
CSNK1DP48730 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.86■□□□□ 0.13
CSNK1DP48730 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1DP48730 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.86■□□□□ 0.13
CSNK1DP48730 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1DP48730 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1DP48730 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.86■□□□□ 0.13
CSNK1DP48730 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1DP48730 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.86■□□□□ 0.13
CSNK1DP48730 RN7SL399P-201ENST00000471648 279 ntBASIC15.86■□□□□ 0.13
CSNK1DP48730 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.86■□□□□ 0.13
CSNK1DP48730 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.86■□□□□ 0.13
CSNK1DP48730 AC190387.1-201ENST00000551683 408 ntBASIC15.86■□□□□ 0.13
CSNK1DP48730 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
CSNK1DP48730 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.86■□□□□ 0.13
CSNK1DP48730 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.86■□□□□ 0.13
CSNK1DP48730 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.86■□□□□ 0.13
CSNK1DP48730 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.86■□□□□ 0.13
CSNK1DP48730 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSNK1DP48730 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CSNK1DP48730 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms