Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BRCC3P46736 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.85■□□□□ 0.29
BRCC3P46736 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
BRCC3P46736 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.85■□□□□ 0.29
BRCC3P46736 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 AC069224.1-201ENST00000566372 1715 ntBASIC16.85■□□□□ 0.29
BRCC3P46736 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
BRCC3P46736 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
BRCC3P46736 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
BRCC3P46736 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.85■□□□□ 0.29
BRCC3P46736 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
BRCC3P46736 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.85■□□□□ 0.29
BRCC3P46736 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.85■□□□□ 0.29
BRCC3P46736 KRT17P8-201ENST00000540749 863 ntBASIC16.85■□□□□ 0.29
BRCC3P46736 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.85■□□□□ 0.29
BRCC3P46736 BRI3BPP1-201ENST00000594224 787 ntBASIC16.85■□□□□ 0.29
BRCC3P46736 AC010319.3-201ENST00000597028 470 ntBASIC16.85■□□□□ 0.29
BRCC3P46736 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.85■□□□□ 0.29
BRCC3P46736 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.85■□□□□ 0.29
BRCC3P46736 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.85■□□□□ 0.29
BRCC3P46736 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 AL162274.1-201ENST00000617191 1098 ntBASIC16.85■□□□□ 0.29
BRCC3P46736 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.85■□□□□ 0.29
BRCC3P46736 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
BRCC3P46736 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 AP003680.1-201ENST00000598970 3660 ntBASIC16.85■□□□□ 0.29
BRCC3P46736 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.85■□□□□ 0.29
BRCC3P46736 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.85■□□□□ 0.29
BRCC3P46736 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.85■□□□□ 0.29
BRCC3P46736 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.85■□□□□ 0.29
BRCC3P46736 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.85■□□□□ 0.29
BRCC3P46736 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRCC3P46736 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.84■□□□□ 0.29
BRCC3P46736 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
BRCC3P46736 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.84■□□□□ 0.29
BRCC3P46736 AC124067.4-201ENST00000519691 2379 ntBASIC16.84■□□□□ 0.29
BRCC3P46736 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
BRCC3P46736 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
BRCC3P46736 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.84■□□□□ 0.29
BRCC3P46736 AL442647.2-201ENST00000429864 857 ntBASIC16.84■□□□□ 0.29
BRCC3P46736 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.84■□□□□ 0.29
BRCC3P46736 AC007389.4-201ENST00000454674 793 ntBASIC16.84■□□□□ 0.29
BRCC3P46736 ACA64.2-201ENST00000459014 129 ntBASIC16.84■□□□□ 0.29
BRCC3P46736 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.84■□□□□ 0.29
BRCC3P46736 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.84■□□□□ 0.29
BRCC3P46736 MIR4313-201ENST00000580760 101 ntBASIC16.84■□□□□ 0.29
BRCC3P46736 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.84■□□□□ 0.29
BRCC3P46736 AC008735.3-201ENST00000596646 500 ntBASIC16.84■□□□□ 0.29
BRCC3P46736 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.84■□□□□ 0.29
BRCC3P46736 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.84■□□□□ 0.29
BRCC3P46736 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
BRCC3P46736 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.84■□□□□ 0.29
BRCC3P46736 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
BRCC3P46736 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.84■□□□□ 0.29
BRCC3P46736 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.84■□□□□ 0.29
BRCC3P46736 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCC3P46736 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 278.4 ms