Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A4P31645 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A4P31645 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SLC6A4P31645 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A4P31645 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A4P31645 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SLC6A4P31645 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A4P31645 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A4P31645 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SLC6A4P31645 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A4P31645 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A4P31645 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A4P31645 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A4P31645 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A4P31645 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A4P31645 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC6A4P31645 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
SLC6A4P31645 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A4P31645 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC6A4P31645 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC6A4P31645 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SLC6A4P31645 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A4P31645 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.27■□□□□ 0.2
SLC6A4P31645 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A4P31645 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
SLC6A4P31645 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SLC6A4P31645 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A4P31645 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A4P31645 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC6A4P31645 AC087499.6-201ENST00000411576 835 ntBASIC16.27■□□□□ 0.2
SLC6A4P31645 TOMM22P5-201ENST00000416399 439 ntBASIC16.27■□□□□ 0.2
SLC6A4P31645 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC6A4P31645 MEP1AP4-201ENST00000423244 1087 ntBASIC16.27■□□□□ 0.2
SLC6A4P31645 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC6A4P31645 RN7SL692P-201ENST00000464677 288 ntBASIC16.27■□□□□ 0.2
SLC6A4P31645 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC6A4P31645 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC6A4P31645 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.27■□□□□ 0.2
SLC6A4P31645 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.27■□□□□ 0.2
SLC6A4P31645 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC6A4P31645 AC005225.4-201ENST00000557330 545 ntBASIC16.27■□□□□ 0.2
SLC6A4P31645 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC6A4P31645 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SLC6A4P31645 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SLC6A4P31645 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A4P31645 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A4P31645 CLK3P2-201ENST00000427566 1453 ntBASIC16.27■□□□□ 0.19
SLC6A4P31645 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A4P31645 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SLC6A4P31645 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A4P31645 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.27■□□□□ 0.19
SLC6A4P31645 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.27■□□□□ 0.19
SLC6A4P31645 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A4P31645 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A4P31645 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A4P31645 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC6A4P31645 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A4P31645 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A4P31645 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC6A4P31645 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A4P31645 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A4P31645 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A4P31645 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A4P31645 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
SLC6A4P31645 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC6A4P31645 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC6A4P31645 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A4P31645 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC6A4P31645 AC123567.1-201ENST00000548294 1261 ntBASIC16.26■□□□□ 0.19
SLC6A4P31645 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.26■□□□□ 0.19
SLC6A4P31645 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A4P31645 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC6A4P31645 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC6A4P31645 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC6A4P31645 AC012645.4-201ENST00000610691 1061 ntBASIC16.26■□□□□ 0.19
SLC6A4P31645 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SLC6A4P31645 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A4P31645 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A4P31645 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A4P31645 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A4P31645 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A4P31645 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC6A4P31645 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A4P31645 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC6A4P31645 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A4P31645 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
SLC6A4P31645 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC6A4P31645 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC6A4P31645 FER1L4-210ENST00000615531 5998 ntBASIC16.26■□□□□ 0.19
SLC6A4P31645 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A4P31645 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC6A4P31645 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC6A4P31645 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A4P31645 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC6A4P31645 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A4P31645 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A4P31645 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC6A4P31645 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A4P31645 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A4P31645 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms