Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CD40LGP29965 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
CD40LGP29965 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.2□□□□□ -0.14
CD40LGP29965 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.2□□□□□ -0.14
CD40LGP29965 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.2□□□□□ -0.14
CD40LGP29965 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.2□□□□□ -0.14
CD40LGP29965 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
CD40LGP29965 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 AL353692.3-201ENST00000407031 1396 ntBASIC14.2□□□□□ -0.14
CD40LGP29965 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.2□□□□□ -0.14
CD40LGP29965 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CD40LGP29965 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.19□□□□□ -0.14
CD40LGP29965 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.19□□□□□ -0.14
CD40LGP29965 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CD40LGP29965 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
CD40LGP29965 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.19□□□□□ -0.14
CD40LGP29965 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.19□□□□□ -0.14
CD40LGP29965 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CD40LGP29965 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.19□□□□□ -0.14
CD40LGP29965 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.19□□□□□ -0.14
CD40LGP29965 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.19□□□□□ -0.14
CD40LGP29965 AL031133.1-201ENST00000406807 723 ntBASIC14.19□□□□□ -0.14
CD40LGP29965 KLF4P1-201ENST00000412782 1185 ntBASIC14.19□□□□□ -0.14
CD40LGP29965 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.19□□□□□ -0.14
CD40LGP29965 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.19□□□□□ -0.14
CD40LGP29965 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CD40LGP29965 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CD40LGP29965 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.19□□□□□ -0.14
CD40LGP29965 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CD40LGP29965 AL356585.2-201ENST00000625078 2396 ntBASIC14.19□□□□□ -0.14
CD40LGP29965 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 TOP3BP1-201ENST00000420768 1380 ntBASIC14.19□□□□□ -0.14
CD40LGP29965 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 ST20-AS1-201ENST00000560255 4223 ntBASIC14.19□□□□□ -0.14
CD40LGP29965 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD40LGP29965 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CD40LGP29965 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD40LGP29965 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.18□□□□□ -0.14
CD40LGP29965 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD40LGP29965 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD40LGP29965 AC027612.1-201ENST00000445234 2395 ntBASIC14.18□□□□□ -0.14
CD40LGP29965 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD40LGP29965 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.18□□□□□ -0.14
CD40LGP29965 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD40LGP29965 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.18□□□□□ -0.14
CD40LGP29965 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD40LGP29965 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD40LGP29965 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.18□□□□□ -0.14
CD40LGP29965 AC011477.6-201ENST00000604980 1927 ntBASIC14.18□□□□□ -0.14
CD40LGP29965 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD40LGP29965 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD40LGP29965 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD40LGP29965 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.18□□□□□ -0.14
CD40LGP29965 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD40LGP29965 IGHGP-201ENST00000390555 1178 ntBASIC14.18□□□□□ -0.14
CD40LGP29965 FAM220CP-201ENST00000395253 831 ntBASIC14.18□□□□□ -0.14
CD40LGP29965 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.18□□□□□ -0.14
CD40LGP29965 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CD40LGP29965 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD40LGP29965 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD40LGP29965 BX276092.5-203ENST00000456199 560 ntBASIC14.18□□□□□ -0.14
CD40LGP29965 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.18□□□□□ -0.14
CD40LGP29965 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD40LGP29965 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.18□□□□□ -0.14
CD40LGP29965 MIR4492-201ENST00000581627 80 ntBASIC14.18□□□□□ -0.14
CD40LGP29965 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.18□□□□□ -0.14
CD40LGP29965 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.18□□□□□ -0.14
CD40LGP29965 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.18□□□□□ -0.14
CD40LGP29965 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.18□□□□□ -0.14
CD40LGP29965 AC099521.3-201ENST00000624251 2938 ntBASIC14.18□□□□□ -0.14
CD40LGP29965 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
CD40LGP29965 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CD40LGP29965 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CD40LGP29965 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.18□□□□□ -0.14
CD40LGP29965 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD40LGP29965 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CD40LGP29965 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CD40LGP29965 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms