Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP2B4P23634 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B4P23634 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.11■□□□□ 0.65
ATP2B4P23634 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP2B4P23634 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2B4P23634 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP2B4P23634 AL606495.2-201ENST00000605867 535 ntBASIC19.11■□□□□ 0.65
ATP2B4P23634 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B4P23634 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B4P23634 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B4P23634 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B4P23634 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ATP2B4P23634 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B4P23634 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B4P23634 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B4P23634 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP2B4P23634 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B4P23634 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2B4P23634 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2B4P23634 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B4P23634 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B4P23634 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2B4P23634 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ATP2B4P23634 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2B4P23634 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B4P23634 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2B4P23634 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2B4P23634 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ATP2B4P23634 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B4P23634 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ATP2B4P23634 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2B4P23634 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ATP2B4P23634 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.1■□□□□ 0.65
ATP2B4P23634 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2B4P23634 AC009542.2-202ENST00000619004 1067 ntBASIC19.1■□□□□ 0.65
ATP2B4P23634 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B4P23634 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2B4P23634 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2B4P23634 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B4P23634 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B4P23634 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B4P23634 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B4P23634 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2B4P23634 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2B4P23634 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2B4P23634 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2B4P23634 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ATP2B4P23634 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2B4P23634 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2B4P23634 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2B4P23634 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.09■□□□□ 0.65
ATP2B4P23634 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2B4P23634 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP2B4P23634 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP2B4P23634 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2B4P23634 RPL13AP20-201ENST00000459725 609 ntBASIC19.09■□□□□ 0.65
ATP2B4P23634 RN7SL560P-201ENST00000577943 264 ntBASIC19.09■□□□□ 0.65
ATP2B4P23634 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ATP2B4P23634 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2B4P23634 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP2B4P23634 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2B4P23634 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP2B4P23634 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
ATP2B4P23634 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2B4P23634 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.09■□□□□ 0.65
ATP2B4P23634 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ATP2B4P23634 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2B4P23634 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.09■□□□□ 0.65
ATP2B4P23634 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2B4P23634 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2B4P23634 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2B4P23634 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATP2B4P23634 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATP2B4P23634 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ATP2B4P23634 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
ATP2B4P23634 AL138799.1-201ENST00000448213 1675 ntBASIC19.08■□□□□ 0.65
ATP2B4P23634 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
ATP2B4P23634 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
ATP2B4P23634 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
ATP2B4P23634 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.08■□□□□ 0.65
ATP2B4P23634 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.08■□□□□ 0.65
ATP2B4P23634 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATP2B4P23634 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.08■□□□□ 0.65
ATP2B4P23634 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATP2B4P23634 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ATP2B4P23634 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2B4P23634 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2B4P23634 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2B4P23634 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.08■□□□□ 0.64
ATP2B4P23634 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2B4P23634 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.08■□□□□ 0.64
ATP2B4P23634 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.08■□□□□ 0.64
ATP2B4P23634 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2B4P23634 KRT18P25-201ENST00000508931 1278 ntBASIC19.08■□□□□ 0.64
ATP2B4P23634 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.08■□□□□ 0.64
ATP2B4P23634 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.08■□□□□ 0.64
ATP2B4P23634 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2B4P23634 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.08■□□□□ 0.64
ATP2B4P23634 AC023310.1-201ENST00000554836 735 ntBASIC19.08■□□□□ 0.64
ATP2B4P23634 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms