Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL1P22362 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CCL1P22362 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CCL1P22362 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CCL1P22362 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL1P22362 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL1P22362 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL1P22362 MTDHP5-201ENST00000598980 586 ntBASIC13.69□□□□□ -0.22
CCL1P22362 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL1P22362 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CCL1P22362 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CCL1P22362 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL1P22362 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL1P22362 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL1P22362 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CCL1P22362 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL1P22362 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL1P22362 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
CCL1P22362 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL1P22362 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CCL1P22362 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
CCL1P22362 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL1P22362 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL1P22362 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL1P22362 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CCL1P22362 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CCL1P22362 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL1P22362 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 AZGP1P1-201ENST00000411909 902 ntBASIC13.68□□□□□ -0.22
CCL1P22362 AC026396.1-201ENST00000419388 421 ntBASIC13.68□□□□□ -0.22
CCL1P22362 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
CCL1P22362 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL1P22362 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CCL1P22362 ALG1L5P-201ENST00000482043 771 ntBASIC13.68□□□□□ -0.22
CCL1P22362 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.68□□□□□ -0.22
CCL1P22362 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CCL1P22362 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.68□□□□□ -0.22
CCL1P22362 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.68□□□□□ -0.22
CCL1P22362 AC022145.2-201ENST00000598203 171 ntBASIC13.68□□□□□ -0.22
CCL1P22362 AC105339.1-204ENST00000636249 355 ntBASIC13.68□□□□□ -0.22
CCL1P22362 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CCL1P22362 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL1P22362 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL1P22362 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CCL1P22362 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CCL1P22362 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CCL1P22362 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL1P22362 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CCL1P22362 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL1P22362 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CCL1P22362 AL607033.1-201ENST00000623900 1599 ntBASIC13.67□□□□□ -0.22
CCL1P22362 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL1P22362 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL1P22362 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CCL1P22362 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL1P22362 ELL2P1-201ENST00000413990 1906 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms