Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
CD28P10747 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
CD28P10747 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.47□□□□□ -0.41
CD28P10747 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
CD28P10747 CTBP2P3-201ENST00000585629 1255 ntBASIC12.47□□□□□ -0.41
CD28P10747 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
CD28P10747 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.47□□□□□ -0.41
CD28P10747 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.47□□□□□ -0.41
CD28P10747 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CD28P10747 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.47□□□□□ -0.41
CD28P10747 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CD28P10747 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CD28P10747 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
CD28P10747 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.47□□□□□ -0.41
CD28P10747 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CD28P10747 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.47□□□□□ -0.41
CD28P10747 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
CD28P10747 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.47□□□□□ -0.41
CD28P10747 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.47□□□□□ -0.41
CD28P10747 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.47□□□□□ -0.41
CD28P10747 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.47□□□□□ -0.41
CD28P10747 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CD28P10747 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.46□□□□□ -0.41
CD28P10747 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CD28P10747 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.46□□□□□ -0.41
CD28P10747 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC12.46□□□□□ -0.41
CD28P10747 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD28P10747 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD28P10747 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD28P10747 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD28P10747 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.46□□□□□ -0.41
CD28P10747 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD28P10747 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD28P10747 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC12.46□□□□□ -0.41
CD28P10747 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD28P10747 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD28P10747 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC12.46□□□□□ -0.41
CD28P10747 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD28P10747 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD28P10747 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD28P10747 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD28P10747 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD28P10747 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD28P10747 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CD28P10747 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.46□□□□□ -0.41
CD28P10747 AC098850.1-201ENST00000419919 790 ntBASIC12.46□□□□□ -0.41
CD28P10747 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.46□□□□□ -0.41
CD28P10747 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.46□□□□□ -0.41
CD28P10747 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.46□□□□□ -0.41
CD28P10747 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.46□□□□□ -0.41
CD28P10747 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.46□□□□□ -0.41
CD28P10747 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.46□□□□□ -0.41
CD28P10747 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD28P10747 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.46□□□□□ -0.41
CD28P10747 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.46□□□□□ -0.41
CD28P10747 AC093726.1-201ENST00000608064 963 ntBASIC12.46□□□□□ -0.41
CD28P10747 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD28P10747 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD28P10747 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.46□□□□□ -0.41
CD28P10747 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CD28P10747 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CD28P10747 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD28P10747 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CD28P10747 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CD28P10747 AC106886.4-201ENST00000623557 2502 ntBASIC12.46□□□□□ -0.42
CD28P10747 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
CD28P10747 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.46□□□□□ -0.42
CD28P10747 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD28P10747 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD28P10747 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CD28P10747 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD28P10747 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CD28P10747 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD28P10747 AL691432.1-201ENST00000596308 1422 ntBASIC12.45□□□□□ -0.42
CD28P10747 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
CD28P10747 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CD28P10747 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD28P10747 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.45□□□□□ -0.42
CD28P10747 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms