Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.03□□□□□ -0.16
UBCP0CG48 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.03□□□□□ -0.16
UBCP0CG48 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.03□□□□□ -0.16
UBCP0CG48 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.03□□□□□ -0.16
UBCP0CG48 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
UBCP0CG48 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
UBCP0CG48 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.03□□□□□ -0.16
UBCP0CG48 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
UBCP0CG48 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.03□□□□□ -0.16
UBCP0CG48 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.03□□□□□ -0.16
UBCP0CG48 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.03□□□□□ -0.16
UBCP0CG48 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.03□□□□□ -0.16
UBCP0CG48 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
UBCP0CG48 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 Z83851.2-201ENST00000609564 659 ntBASIC14.03□□□□□ -0.16
UBCP0CG48 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.03□□□□□ -0.16
UBCP0CG48 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.03□□□□□ -0.16
UBCP0CG48 BCAR1-209ENST00000546196 1340 ntBASIC14.03□□□□□ -0.16
UBCP0CG48 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.03□□□□□ -0.16
UBCP0CG48 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
UBCP0CG48 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.03□□□□□ -0.16
UBCP0CG48 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UBCP0CG48 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.03□□□□□ -0.16
UBCP0CG48 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.03□□□□□ -0.16
UBCP0CG48 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UBCP0CG48 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 AC134407.2-201ENST00000625089 1978 ntBASIC14.03□□□□□ -0.16
UBCP0CG48 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.03□□□□□ -0.16
UBCP0CG48 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
UBCP0CG48 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBCP0CG48 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.03□□□□□ -0.16
UBCP0CG48 PCDHA3-202ENST00000532566 4594 ntBASIC14.03□□□□□ -0.16
UBCP0CG48 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.03□□□□□ -0.16
UBCP0CG48 OR2I1P-209ENST00000641730 5365 ntBASIC14.03□□□□□ -0.16
UBCP0CG48 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
UBCP0CG48 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
UBCP0CG48 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBCP0CG48 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBCP0CG48 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBCP0CG48 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
UBCP0CG48 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.02□□□□□ -0.16
UBCP0CG48 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.02□□□□□ -0.16
UBCP0CG48 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.02□□□□□ -0.16
UBCP0CG48 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
UBCP0CG48 AC006486.2-201ENST00000624246 2199 ntBASIC14.02□□□□□ -0.16
UBCP0CG48 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UBCP0CG48 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
UBCP0CG48 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.02□□□□□ -0.16
UBCP0CG48 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.02□□□□□ -0.16
UBCP0CG48 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBCP0CG48 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
UBCP0CG48 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UBCP0CG48 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
UBCP0CG48 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UBCP0CG48 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.02□□□□□ -0.16
UBCP0CG48 AC025580.3-201ENST00000617932 1424 ntBASIC14.02□□□□□ -0.16
UBCP0CG48 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
UBCP0CG48 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBCP0CG48 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
UBCP0CG48 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBCP0CG48 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.02□□□□□ -0.17
UBCP0CG48 GPX1P2-201ENST00000429271 606 ntBASIC14.02□□□□□ -0.17
UBCP0CG48 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBCP0CG48 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
UBCP0CG48 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.02□□□□□ -0.17
UBCP0CG48 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.02□□□□□ -0.17
UBCP0CG48 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.02□□□□□ -0.17
UBCP0CG48 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
UBCP0CG48 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBCP0CG48 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.02□□□□□ -0.17
UBCP0CG48 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBCP0CG48 AL662844.1-201ENST00000546340 181 ntBASIC14.02□□□□□ -0.17
UBCP0CG48 AC243562.2-201ENST00000561247 970 ntBASIC14.02□□□□□ -0.17
UBCP0CG48 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.02□□□□□ -0.17
UBCP0CG48 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.02□□□□□ -0.17
UBCP0CG48 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.02□□□□□ -0.17
UBCP0CG48 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.02□□□□□ -0.17
UBCP0CG48 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
UBCP0CG48 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBCP0CG48 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBCP0CG48 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
UBCP0CG48 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.02□□□□□ -0.17
UBCP0CG48 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms