Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC6P09630 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC6P09630 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.83■□□□□ 0.44
HOXC6P09630 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC6P09630 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC6P09630 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HOXC6P09630 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.83■□□□□ 0.44
HOXC6P09630 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC6P09630 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC6P09630 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC6P09630 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HOXC6P09630 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HOXC6P09630 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.82■□□□□ 0.44
HOXC6P09630 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC6P09630 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC6P09630 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.82■□□□□ 0.44
HOXC6P09630 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 AC015910.1-201ENST00000579400 975 ntBASIC17.82■□□□□ 0.44
HOXC6P09630 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC6P09630 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC6P09630 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 AC005052.1-201ENST00000625181 2492 ntBASIC17.82■□□□□ 0.44
HOXC6P09630 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC6P09630 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC6P09630 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC6P09630 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC6P09630 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
HOXC6P09630 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HOXC6P09630 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXC6P09630 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HOXC6P09630 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
HOXC6P09630 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.81■□□□□ 0.44
HOXC6P09630 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXC6P09630 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
HOXC6P09630 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXC6P09630 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.81■□□□□ 0.44
HOXC6P09630 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.81■□□□□ 0.44
HOXC6P09630 GAPDHP40-201ENST00000505218 1006 ntBASIC17.81■□□□□ 0.44
HOXC6P09630 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.81■□□□□ 0.44
HOXC6P09630 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.81■□□□□ 0.44
HOXC6P09630 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.81■□□□□ 0.44
HOXC6P09630 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXC6P09630 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 AC107373.2-201ENST00000607735 490 ntBASIC17.81■□□□□ 0.44
HOXC6P09630 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXC6P09630 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.81■□□□□ 0.44
HOXC6P09630 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.81■□□□□ 0.44
HOXC6P09630 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXC6P09630 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HOXC6P09630 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HOXC6P09630 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
HOXC6P09630 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
HOXC6P09630 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXC6P09630 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC6P09630 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC6P09630 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC6P09630 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HOXC6P09630 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms