Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RBP1P09455 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RBP1P09455 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RBP1P09455 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RBP1P09455 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RBP1P09455 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.74■□□□□ 0.11
RBP1P09455 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RBP1P09455 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.73■□□□□ 0.11
RBP1P09455 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RBP1P09455 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RBP1P09455 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RBP1P09455 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.73■□□□□ 0.11
RBP1P09455 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
RBP1P09455 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RBP1P09455 FAM220BP-201ENST00000377689 816 ntBASIC15.73■□□□□ 0.11
RBP1P09455 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.73■□□□□ 0.11
RBP1P09455 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
RBP1P09455 AL355306.1-201ENST00000415580 579 ntBASIC15.73■□□□□ 0.11
RBP1P09455 AL590627.1-203ENST00000421194 1026 ntBASIC15.73■□□□□ 0.11
RBP1P09455 RPS8P6-201ENST00000426177 609 ntBASIC15.73■□□□□ 0.11
RBP1P09455 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.73■□□□□ 0.11
RBP1P09455 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.73■□□□□ 0.11
RBP1P09455 KRT18P3-201ENST00000451602 1288 ntBASIC15.73■□□□□ 0.11
RBP1P09455 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.73■□□□□ 0.11
RBP1P09455 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.73■□□□□ 0.11
RBP1P09455 RNA5SP410-201ENST00000516285 106 ntBASIC15.73■□□□□ 0.11
RBP1P09455 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.73■□□□□ 0.11
RBP1P09455 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.73■□□□□ 0.11
RBP1P09455 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.73■□□□□ 0.11
RBP1P09455 FAM197Y3-203ENST00000618346 717 ntBASIC15.73■□□□□ 0.11
RBP1P09455 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
RBP1P09455 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RBP1P09455 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.73■□□□□ 0.11
RBP1P09455 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RBP1P09455 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBP1P09455 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBP1P09455 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.72■□□□□ 0.11
RBP1P09455 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.72■□□□□ 0.11
RBP1P09455 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.72■□□□□ 0.11
RBP1P09455 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RBP1P09455 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RBP1P09455 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RBP1P09455 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.72■□□□□ 0.11
RBP1P09455 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.72■□□□□ 0.11
RBP1P09455 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBP1P09455 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RBP1P09455 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RBP1P09455 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
RBP1P09455 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBP1P09455 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBP1P09455 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBP1P09455 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RBP1P09455 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RBP1P09455 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RBP1P09455 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBP1P09455 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBP1P09455 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RBP1P09455 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RBP1P09455 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBP1P09455 MED15P5-201ENST00000423150 992 ntBASIC15.72■□□□□ 0.11
RBP1P09455 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.72■□□□□ 0.11
RBP1P09455 AC142381.1-201ENST00000426099 345 ntBASIC15.72■□□□□ 0.11
RBP1P09455 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.72■□□□□ 0.11
RBP1P09455 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.72■□□□□ 0.11
RBP1P09455 RN7SL589P-201ENST00000481268 310 ntBASIC15.72■□□□□ 0.11
RBP1P09455 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.72■□□□□ 0.11
RBP1P09455 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.72■□□□□ 0.11
RBP1P09455 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.72■□□□□ 0.11
RBP1P09455 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.72■□□□□ 0.11
RBP1P09455 MIR4313-201ENST00000580760 101 ntBASIC15.72■□□□□ 0.11
RBP1P09455 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.72■□□□□ 0.11
RBP1P09455 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RBP1P09455 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBP1P09455 PCDHA3-202ENST00000532566 4594 ntBASIC15.72■□□□□ 0.11
RBP1P09455 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
RBP1P09455 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RBP1P09455 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RBP1P09455 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms