Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
CYP3A4P08684 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CYP3A4P08684 AC098614.1-201ENST00000368528 745 ntBASIC17.76■□□□□ 0.43
CYP3A4P08684 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.76■□□□□ 0.43
CYP3A4P08684 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.76■□□□□ 0.43
CYP3A4P08684 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 AC104596.2-201ENST00000512793 793 ntBASIC17.76■□□□□ 0.43
CYP3A4P08684 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.76■□□□□ 0.43
CYP3A4P08684 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.76■□□□□ 0.43
CYP3A4P08684 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.76■□□□□ 0.43
CYP3A4P08684 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.76■□□□□ 0.43
CYP3A4P08684 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 AC127383.1-201ENST00000444697 1800 ntBASIC17.76■□□□□ 0.43
CYP3A4P08684 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CYP3A4P08684 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.76■□□□□ 0.43
CYP3A4P08684 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CYP3A4P08684 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CYP3A4P08684 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYP3A4P08684 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CYP3A4P08684 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CYP3A4P08684 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CYP3A4P08684 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CYP3A4P08684 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CYP3A4P08684 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.75■□□□□ 0.43
CYP3A4P08684 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CYP3A4P08684 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CYP3A4P08684 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CYP3A4P08684 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CYP3A4P08684 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.75■□□□□ 0.43
CYP3A4P08684 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CYP3A4P08684 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CYP3A4P08684 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.75■□□□□ 0.43
CYP3A4P08684 AL442647.2-201ENST00000429864 857 ntBASIC17.75■□□□□ 0.43
CYP3A4P08684 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.75■□□□□ 0.43
CYP3A4P08684 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.75■□□□□ 0.43
CYP3A4P08684 RN7SL692P-201ENST00000464677 288 ntBASIC17.75■□□□□ 0.43
CYP3A4P08684 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.75■□□□□ 0.43
CYP3A4P08684 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.75■□□□□ 0.43
CYP3A4P08684 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CYP3A4P08684 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.75■□□□□ 0.43
CYP3A4P08684 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.75■□□□□ 0.43
CYP3A4P08684 AC005225.4-201ENST00000557330 545 ntBASIC17.75■□□□□ 0.43
CYP3A4P08684 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.75■□□□□ 0.43
CYP3A4P08684 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CYP3A4P08684 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CYP3A4P08684 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.75■□□□□ 0.43
CYP3A4P08684 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CYP3A4P08684 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CYP3A4P08684 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.75■□□□□ 0.43
CYP3A4P08684 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CYP3A4P08684 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CYP3A4P08684 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.75■□□□□ 0.43
CYP3A4P08684 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.75■□□□□ 0.43
CYP3A4P08684 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CYP3A4P08684 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.75■□□□□ 0.43
CYP3A4P08684 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CYP3A4P08684 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CYP3A4P08684 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.74■□□□□ 0.43
CYP3A4P08684 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.74■□□□□ 0.43
CYP3A4P08684 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CYP3A4P08684 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CYP3A4P08684 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CYP3A4P08684 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CYP3A4P08684 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CYP3A4P08684 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CYP3A4P08684 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.74■□□□□ 0.43
CYP3A4P08684 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CYP3A4P08684 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CYP3A4P08684 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.74■□□□□ 0.43
CYP3A4P08684 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CYP3A4P08684 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CYP3A4P08684 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.74■□□□□ 0.43
CYP3A4P08684 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CYP3A4P08684 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.74■□□□□ 0.43
CYP3A4P08684 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CYP3A4P08684 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.74■□□□□ 0.43
CYP3A4P08684 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.74■□□□□ 0.43
CYP3A4P08684 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CYP3A4P08684 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CYP3A4P08684 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.74■□□□□ 0.43
CYP3A4P08684 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CYP3A4P08684 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.74■□□□□ 0.43
CYP3A4P08684 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CYP3A4P08684 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.74■□□□□ 0.43
CYP3A4P08684 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.74■□□□□ 0.43
CYP3A4P08684 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms