Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CTSDP07339 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.27□□□□□ -0.28
CTSDP07339 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
CTSDP07339 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.27□□□□□ -0.28
CTSDP07339 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.27□□□□□ -0.29
CTSDP07339 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
CTSDP07339 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.27□□□□□ -0.29
CTSDP07339 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CTSDP07339 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.27□□□□□ -0.29
CTSDP07339 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.29
CTSDP07339 KRT18P34-201ENST00000488218 1270 ntBASIC13.27□□□□□ -0.29
CTSDP07339 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.27□□□□□ -0.29
CTSDP07339 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.27□□□□□ -0.29
CTSDP07339 AL031432.2-201ENST00000566714 459 ntBASIC13.27□□□□□ -0.29
CTSDP07339 AL928711.1-201ENST00000570165 459 ntBASIC13.27□□□□□ -0.29
CTSDP07339 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.27□□□□□ -0.29
CTSDP07339 AL121772.3-201ENST00000610840 674 ntBASIC13.27□□□□□ -0.29
CTSDP07339 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.27□□□□□ -0.29
CTSDP07339 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CTSDP07339 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
CTSDP07339 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.27□□□□□ -0.29
CTSDP07339 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.27□□□□□ -0.29
CTSDP07339 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 AL589702.1-201ENST00000641229 1509 ntBASIC13.27□□□□□ -0.29
CTSDP07339 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
CTSDP07339 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.27□□□□□ -0.29
CTSDP07339 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CTSDP07339 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.27□□□□□ -0.29
CTSDP07339 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.27□□□□□ -0.29
CTSDP07339 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSDP07339 FGD5P1-202ENST00000614866 2498 ntBASIC13.27□□□□□ -0.29
CTSDP07339 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.27□□□□□ -0.29
CTSDP07339 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.26□□□□□ -0.29
CTSDP07339 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CTSDP07339 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.26□□□□□ -0.29
CTSDP07339 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.26□□□□□ -0.29
CTSDP07339 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.26□□□□□ -0.29
CTSDP07339 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.26□□□□□ -0.29
CTSDP07339 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CTSDP07339 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CTSDP07339 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CTSDP07339 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.26□□□□□ -0.29
CTSDP07339 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.26□□□□□ -0.29
CTSDP07339 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 KRT18P31-201ENST00000506277 1292 ntBASIC13.26□□□□□ -0.29
CTSDP07339 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.26□□□□□ -0.29
CTSDP07339 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.26□□□□□ -0.29
CTSDP07339 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.26□□□□□ -0.29
CTSDP07339 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CTSDP07339 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 CLEC4GP1-201ENST00000596555 870 ntBASIC13.26□□□□□ -0.29
CTSDP07339 AC148477.4-201ENST00000613430 1793 ntBASIC13.26□□□□□ -0.29
CTSDP07339 AC012313.10-201ENST00000623509 926 ntBASIC13.26□□□□□ -0.29
CTSDP07339 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.26□□□□□ -0.29
CTSDP07339 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CTSDP07339 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CTSDP07339 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSDP07339 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.26□□□□□ -0.29
CTSDP07339 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.26□□□□□ -0.29
CTSDP07339 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CTSDP07339 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.26□□□□□ -0.29
CTSDP07339 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms