Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC3P02656 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOC3P02656 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
APOC3P02656 AC131902.2-201ENST00000566892 2172 ntBASIC12.8□□□□□ -0.36
APOC3P02656 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC3P02656 ZBED1P1-201ENST00000502364 1930 ntBASIC12.8□□□□□ -0.36
APOC3P02656 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
APOC3P02656 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC3P02656 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC3P02656 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC3P02656 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
APOC3P02656 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC3P02656 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
APOC3P02656 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC3P02656 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 STRCP1-201ENST00000509801 5328 ntBASIC12.79□□□□□ -0.36
APOC3P02656 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC3P02656 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
APOC3P02656 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
APOC3P02656 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
APOC3P02656 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
APOC3P02656 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.79□□□□□ -0.36
APOC3P02656 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC3P02656 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC3P02656 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
APOC3P02656 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
APOC3P02656 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 NIFKP9-201ENST00000419265 221 ntBASIC12.79□□□□□ -0.36
APOC3P02656 AC096633.1-201ENST00000422446 749 ntBASIC12.79□□□□□ -0.36
APOC3P02656 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.79□□□□□ -0.36
APOC3P02656 GATS-209ENST00000454084 1030 ntTSL 3 BASIC12.79□□□□□ -0.36
APOC3P02656 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC12.79□□□□□ -0.36
APOC3P02656 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.79□□□□□ -0.36
APOC3P02656 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC12.79□□□□□ -0.36
APOC3P02656 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
APOC3P02656 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.79□□□□□ -0.36
APOC3P02656 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC3P02656 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC3P02656 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC3P02656 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.79□□□□□ -0.36
APOC3P02656 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
APOC3P02656 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC3P02656 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC3P02656 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.79□□□□□ -0.36
APOC3P02656 KRT8P49-201ENST00000604166 1432 ntBASIC12.79□□□□□ -0.36
APOC3P02656 MEX3B-202ENST00000558133 4333 ntBASIC12.79□□□□□ -0.36
APOC3P02656 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.78□□□□□ -0.36
APOC3P02656 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.78□□□□□ -0.36
APOC3P02656 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
APOC3P02656 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.78□□□□□ -0.36
APOC3P02656 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.78□□□□□ -0.36
APOC3P02656 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
APOC3P02656 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
APOC3P02656 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.78□□□□□ -0.36
APOC3P02656 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
APOC3P02656 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
APOC3P02656 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
APOC3P02656 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
APOC3P02656 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
APOC3P02656 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC12.78□□□□□ -0.36
APOC3P02656 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC12.78□□□□□ -0.36
APOC3P02656 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
APOC3P02656 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
APOC3P02656 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC12.78□□□□□ -0.36
APOC3P02656 AC009154.2-201ENST00000621177 724 ntBASIC12.78□□□□□ -0.36
APOC3P02656 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.78□□□□□ -0.36
APOC3P02656 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.78□□□□□ -0.36
APOC3P02656 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC3P02656 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.78□□□□□ -0.36
APOC3P02656 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms