Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.18□□□□□ -0.14
APOC1P02654 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
APOC1P02654 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.18□□□□□ -0.14
APOC1P02654 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
APOC1P02654 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.18□□□□□ -0.14
APOC1P02654 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
APOC1P02654 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
APOC1P02654 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
APOC1P02654 AP005117.1-202ENST00000581724 1908 ntBASIC14.18□□□□□ -0.14
APOC1P02654 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.18□□□□□ -0.14
APOC1P02654 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.18□□□□□ -0.14
APOC1P02654 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 AL590627.1-203ENST00000421194 1026 ntBASIC14.18□□□□□ -0.14
APOC1P02654 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.18□□□□□ -0.14
APOC1P02654 AC007967.2-201ENST00000432613 625 ntBASIC14.18□□□□□ -0.14
APOC1P02654 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.18□□□□□ -0.14
APOC1P02654 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.18□□□□□ -0.14
APOC1P02654 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.18□□□□□ -0.14
APOC1P02654 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.18□□□□□ -0.14
APOC1P02654 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
APOC1P02654 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.18□□□□□ -0.14
APOC1P02654 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.18□□□□□ -0.14
APOC1P02654 BX640515.1-201ENST00000617215 977 ntBASIC14.18□□□□□ -0.14
APOC1P02654 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 AL137784.3-201ENST00000623858 2288 ntBASIC14.18□□□□□ -0.14
APOC1P02654 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.18□□□□□ -0.14
APOC1P02654 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.18□□□□□ -0.14
APOC1P02654 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
APOC1P02654 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
APOC1P02654 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.17□□□□□ -0.14
APOC1P02654 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 AKAP8P1-201ENST00000434743 1349 ntBASIC14.17□□□□□ -0.14
APOC1P02654 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
APOC1P02654 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
APOC1P02654 AC092384.3-202ENST00000564646 2873 ntBASIC14.17□□□□□ -0.14
APOC1P02654 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
APOC1P02654 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.17□□□□□ -0.14
APOC1P02654 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
APOC1P02654 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
APOC1P02654 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
APOC1P02654 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.17□□□□□ -0.14
APOC1P02654 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.17□□□□□ -0.14
APOC1P02654 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.17□□□□□ -0.14
APOC1P02654 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.17□□□□□ -0.14
APOC1P02654 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.17□□□□□ -0.14
APOC1P02654 FAM86C2P-203ENST00000528684 1004 ntBASIC14.17□□□□□ -0.14
APOC1P02654 RARRES2P8-201ENST00000566335 367 ntBASIC14.17□□□□□ -0.14
APOC1P02654 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.17□□□□□ -0.14
APOC1P02654 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.17□□□□□ -0.14
APOC1P02654 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOC1P02654 AC011477.6-201ENST00000604980 1927 ntBASIC14.17□□□□□ -0.14
APOC1P02654 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
APOC1P02654 AC008677.1-201ENST00000519230 1561 ntBASIC14.17□□□□□ -0.14
APOC1P02654 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.17□□□□□ -0.14
APOC1P02654 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.17□□□□□ -0.14
APOC1P02654 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.16□□□□□ -0.14
APOC1P02654 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms