Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 SPDYE10P-202ENST00000612005 668 ntBASIC15.49■□□□□ 0.07
KRT6AP02538 SPDYE8P-202ENST00000612377 668 ntBASIC15.49■□□□□ 0.07
KRT6AP02538 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.49■□□□□ 0.07
KRT6AP02538 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.49■□□□□ 0.07
KRT6AP02538 AC092902.6-201ENST00000641783 218 ntBASIC15.49■□□□□ 0.07
KRT6AP02538 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT6AP02538 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 CICP13-201ENST00000422015 2789 ntBASIC15.49■□□□□ 0.07
KRT6AP02538 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
KRT6AP02538 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
KRT6AP02538 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
KRT6AP02538 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.49■□□□□ 0.07
KRT6AP02538 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
KRT6AP02538 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
KRT6AP02538 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.48■□□□□ 0.07
KRT6AP02538 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.48■□□□□ 0.07
KRT6AP02538 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
KRT6AP02538 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
KRT6AP02538 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
KRT6AP02538 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.48■□□□□ 0.07
KRT6AP02538 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
KRT6AP02538 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
KRT6AP02538 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 FAM220BP-201ENST00000377689 816 ntBASIC15.48■□□□□ 0.07
KRT6AP02538 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
KRT6AP02538 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 AC026396.1-201ENST00000419388 421 ntBASIC15.48■□□□□ 0.07
KRT6AP02538 ACTG1P14-201ENST00000446382 1122 ntBASIC15.48■□□□□ 0.07
KRT6AP02538 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.48■□□□□ 0.07
KRT6AP02538 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.48■□□□□ 0.07
KRT6AP02538 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 IGHV3-62-201ENST00000520057 340 ntBASIC15.48■□□□□ 0.07
KRT6AP02538 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.48■□□□□ 0.07
KRT6AP02538 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.48■□□□□ 0.07
KRT6AP02538 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.48■□□□□ 0.07
KRT6AP02538 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.48■□□□□ 0.07
KRT6AP02538 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.48■□□□□ 0.07
KRT6AP02538 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.48■□□□□ 0.07
KRT6AP02538 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.48■□□□□ 0.07
KRT6AP02538 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.48■□□□□ 0.07
KRT6AP02538 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 TMBIM7P-203ENST00000641617 1718 ntBASIC15.48■□□□□ 0.07
KRT6AP02538 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
KRT6AP02538 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
KRT6AP02538 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT6AP02538 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
KRT6AP02538 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.47■□□□□ 0.07
KRT6AP02538 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
KRT6AP02538 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
KRT6AP02538 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
KRT6AP02538 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.47■□□□□ 0.07
KRT6AP02538 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.47■□□□□ 0.07
KRT6AP02538 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.47■□□□□ 0.07
KRT6AP02538 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.47■□□□□ 0.07
KRT6AP02538 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.47■□□□□ 0.07
KRT6AP02538 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
KRT6AP02538 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT6AP02538 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms