Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.98■□□□□ 0.15
CBX6O95503 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.98■□□□□ 0.15
CBX6O95503 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CBX6O95503 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CBX6O95503 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CBX6O95503 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CBX6O95503 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.98■□□□□ 0.15
CBX6O95503 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.98■□□□□ 0.15
CBX6O95503 AC073592.4-201ENST00000623827 446 ntBASIC15.98■□□□□ 0.15
CBX6O95503 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.98■□□□□ 0.15
CBX6O95503 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBX6O95503 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBX6O95503 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBX6O95503 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBX6O95503 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.98■□□□□ 0.15
CBX6O95503 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CBX6O95503 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX6O95503 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX6O95503 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CBX6O95503 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CBX6O95503 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX6O95503 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.97■□□□□ 0.15
CBX6O95503 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CBX6O95503 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.97■□□□□ 0.15
CBX6O95503 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX6O95503 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.97■□□□□ 0.15
CBX6O95503 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.97■□□□□ 0.15
CBX6O95503 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CBX6O95503 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CBX6O95503 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.97■□□□□ 0.15
CBX6O95503 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.97■□□□□ 0.15
CBX6O95503 AC068587.6-202ENST00000641839 5619 ntBASIC15.97■□□□□ 0.15
CBX6O95503 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CBX6O95503 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CBX6O95503 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CBX6O95503 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CBX6O95503 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.97■□□□□ 0.15
CBX6O95503 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX6O95503 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.97■□□□□ 0.15
CBX6O95503 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.97■□□□□ 0.15
CBX6O95503 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CBX6O95503 AC136632.2-201ENST00000512891 861 ntBASIC15.97■□□□□ 0.15
CBX6O95503 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CBX6O95503 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CBX6O95503 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
CBX6O95503 MIR4469-201ENST00000583919 79 ntBASIC15.97■□□□□ 0.15
CBX6O95503 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.97■□□□□ 0.15
CBX6O95503 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.97■□□□□ 0.15
CBX6O95503 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.97■□□□□ 0.15
CBX6O95503 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CBX6O95503 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.97■□□□□ 0.15
CBX6O95503 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX6O95503 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CBX6O95503 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CBX6O95503 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CBX6O95503 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX6O95503 LINC01101-201ENST00000622953 1884 ntBASIC15.97■□□□□ 0.15
CBX6O95503 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.97■□□□□ 0.15
CBX6O95503 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.97■□□□□ 0.15
CBX6O95503 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX6O95503 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX6O95503 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.96■□□□□ 0.15
CBX6O95503 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX6O95503 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX6O95503 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CBX6O95503 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX6O95503 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CBX6O95503 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX6O95503 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CBX6O95503 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX6O95503 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX6O95503 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.96■□□□□ 0.15
CBX6O95503 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
CBX6O95503 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.96■□□□□ 0.15
CBX6O95503 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.96■□□□□ 0.15
CBX6O95503 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.96■□□□□ 0.15
CBX6O95503 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.96■□□□□ 0.15
CBX6O95503 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.96■□□□□ 0.15
CBX6O95503 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.96■□□□□ 0.15
CBX6O95503 MPDU1-223ENST00000582151 728 ntBASIC15.96■□□□□ 0.15
CBX6O95503 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.96■□□□□ 0.15
CBX6O95503 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.96■□□□□ 0.15
CBX6O95503 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.96■□□□□ 0.15
CBX6O95503 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX6O95503 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.96■□□□□ 0.15
CBX6O95503 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX6O95503 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX6O95503 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX6O95503 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CBX6O95503 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX6O95503 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CBX6O95503 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CBX6O95503 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CBX6O95503 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.96■□□□□ 0.14
CBX6O95503 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CBX6O95503 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CBX6O95503 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CBX6O95503 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.95■□□□□ 0.14
CBX6O95503 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CBX6O95503 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms