Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.81■□□□□ 0.28
RTN3O95197 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RTN3O95197 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.8■□□□□ 0.28
RTN3O95197 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.8■□□□□ 0.28
RTN3O95197 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.8■□□□□ 0.28
RTN3O95197 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
RTN3O95197 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RTN3O95197 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RTN3O95197 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RTN3O95197 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.8■□□□□ 0.28
RTN3O95197 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RTN3O95197 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.8■□□□□ 0.28
RTN3O95197 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.8■□□□□ 0.28
RTN3O95197 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.8■□□□□ 0.28
RTN3O95197 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
RTN3O95197 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.8■□□□□ 0.28
RTN3O95197 AC025048.3-201ENST00000590609 569 ntBASIC16.8■□□□□ 0.28
RTN3O95197 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 AC074044.1-201ENST00000609673 707 ntBASIC16.8■□□□□ 0.28
RTN3O95197 AC005702.4-201ENST00000618393 416 ntBASIC16.8■□□□□ 0.28
RTN3O95197 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.8■□□□□ 0.28
RTN3O95197 AL109936.8-201ENST00000641772 604 ntBASIC16.8■□□□□ 0.28
RTN3O95197 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RTN3O95197 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.8■□□□□ 0.28
RTN3O95197 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.8■□□□□ 0.28
RTN3O95197 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN3O95197 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.8■□□□□ 0.28
RTN3O95197 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.8■□□□□ 0.28
RTN3O95197 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.8■□□□□ 0.28
RTN3O95197 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.79■□□□□ 0.28
RTN3O95197 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.79■□□□□ 0.28
RTN3O95197 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.79■□□□□ 0.28
RTN3O95197 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RTN3O95197 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.79■□□□□ 0.28
RTN3O95197 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.79■□□□□ 0.28
RTN3O95197 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.79■□□□□ 0.28
RTN3O95197 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.79■□□□□ 0.28
RTN3O95197 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.79■□□□□ 0.28
RTN3O95197 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.79■□□□□ 0.28
RTN3O95197 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.79■□□□□ 0.28
RTN3O95197 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.79■□□□□ 0.28
RTN3O95197 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.79■□□□□ 0.28
RTN3O95197 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.79■□□□□ 0.28
RTN3O95197 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.79■□□□□ 0.28
RTN3O95197 MTHFR-217ENST00000641820 1569 ntBASIC16.79■□□□□ 0.28
RTN3O95197 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.79■□□□□ 0.28
RTN3O95197 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.79■□□□□ 0.28
RTN3O95197 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
RTN3O95197 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN3O95197 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RTN3O95197 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTN3O95197 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTN3O95197 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTN3O95197 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTN3O95197 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTN3O95197 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTN3O95197 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms