Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC098850.1-201ENST00000419919 790 ntBASIC16.64■□□□□ 0.25
BEST1O76090 DFFBP1-201ENST00000433250 979 ntBASIC16.64■□□□□ 0.25
BEST1O76090 AL353779.1-201ENST00000434793 351 ntBASIC16.64■□□□□ 0.25
BEST1O76090 AC093004.1-201ENST00000508850 424 ntBASIC16.64■□□□□ 0.25
BEST1O76090 SLED1-202ENST00000512051 380 ntBASIC16.64■□□□□ 0.25
BEST1O76090 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.64■□□□□ 0.25
BEST1O76090 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.64■□□□□ 0.25
BEST1O76090 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.64■□□□□ 0.25
BEST1O76090 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.64■□□□□ 0.25
BEST1O76090 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
BEST1O76090 MIR8072-201ENST00000614241 80 ntBASIC16.64■□□□□ 0.25
BEST1O76090 AL158212.4-201ENST00000624062 1286 ntBASIC16.64■□□□□ 0.25
BEST1O76090 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST1O76090 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.64■□□□□ 0.25
BEST1O76090 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BEST1O76090 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
BEST1O76090 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST1O76090 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
BEST1O76090 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.64■□□□□ 0.25
BEST1O76090 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST1O76090 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST1O76090 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST1O76090 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BEST1O76090 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST1O76090 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST1O76090 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.63■□□□□ 0.25
BEST1O76090 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BEST1O76090 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.63■□□□□ 0.25
BEST1O76090 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
BEST1O76090 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.63■□□□□ 0.25
BEST1O76090 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BEST1O76090 CLK3P2-201ENST00000427566 1453 ntBASIC16.63■□□□□ 0.25
BEST1O76090 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST1O76090 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.63■□□□□ 0.25
BEST1O76090 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
BEST1O76090 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST1O76090 TOMM22P5-201ENST00000416399 439 ntBASIC16.63■□□□□ 0.25
BEST1O76090 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BEST1O76090 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.63■□□□□ 0.25
BEST1O76090 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BEST1O76090 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BEST1O76090 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.63■□□□□ 0.25
BEST1O76090 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.63■□□□□ 0.25
BEST1O76090 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST1O76090 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
BEST1O76090 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.63■□□□□ 0.25
BEST1O76090 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.63■□□□□ 0.25
BEST1O76090 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.63■□□□□ 0.25
BEST1O76090 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST1O76090 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
BEST1O76090 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
BEST1O76090 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.63■□□□□ 0.25
BEST1O76090 PAUPAR-201ENST00000630360 2965 ntBASIC16.63■□□□□ 0.25
BEST1O76090 AC092127.1-201ENST00000567093 3455 ntBASIC16.63■□□□□ 0.25
BEST1O76090 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.63■□□□□ 0.25
BEST1O76090 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BEST1O76090 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
BEST1O76090 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.63■□□□□ 0.25
BEST1O76090 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.62■□□□□ 0.25
BEST1O76090 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST1O76090 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST1O76090 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST1O76090 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST1O76090 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
BEST1O76090 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.62■□□□□ 0.25
BEST1O76090 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST1O76090 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
BEST1O76090 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST1O76090 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.62■□□□□ 0.25
BEST1O76090 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST1O76090 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
BEST1O76090 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST1O76090 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST1O76090 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.62■□□□□ 0.25
BEST1O76090 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.62■□□□□ 0.25
BEST1O76090 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.62■□□□□ 0.25
BEST1O76090 AC055876.2-201ENST00000531834 546 ntBASIC16.62■□□□□ 0.25
BEST1O76090 RARRES2P5-201ENST00000564013 466 ntBASIC16.62■□□□□ 0.25
BEST1O76090 WASH4P-201ENST00000564273 1246 ntBASIC16.62■□□□□ 0.25
BEST1O76090 TP53TG3HP-202ENST00000569755 579 ntBASIC16.62■□□□□ 0.25
BEST1O76090 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
BEST1O76090 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.62■□□□□ 0.25
BEST1O76090 AC105233.6-201ENST00000642093 218 ntBASIC16.62■□□□□ 0.25
BEST1O76090 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.62■□□□□ 0.25
BEST1O76090 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
BEST1O76090 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST1O76090 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.62■□□□□ 0.25
BEST1O76090 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST1O76090 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.62■□□□□ 0.25
BEST1O76090 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST1O76090 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST1O76090 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST1O76090 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.62■□□□□ 0.25
BEST1O76090 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST1O76090 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
BEST1O76090 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST1O76090 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST1O76090 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST1O76090 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST1O76090 AC009090.5-201ENST00000624886 2285 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms