Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.28□□□□□ -0.12
ZIC3O60481 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 AC190387.1-201ENST00000551683 408 ntBASIC14.28□□□□□ -0.12
ZIC3O60481 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.28□□□□□ -0.12
ZIC3O60481 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.28□□□□□ -0.12
ZIC3O60481 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.28□□□□□ -0.12
ZIC3O60481 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ZIC3O60481 AL132655.2-201ENST00000596276 594 ntBASIC14.28□□□□□ -0.12
ZIC3O60481 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.28□□□□□ -0.12
ZIC3O60481 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.28□□□□□ -0.12
ZIC3O60481 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.28□□□□□ -0.12
ZIC3O60481 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.28□□□□□ -0.12
ZIC3O60481 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ZIC3O60481 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZIC3O60481 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ZIC3O60481 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC3O60481 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
ZIC3O60481 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC3O60481 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
ZIC3O60481 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC3O60481 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.27□□□□□ -0.12
ZIC3O60481 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC3O60481 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.27□□□□□ -0.12
ZIC3O60481 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC3O60481 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.27□□□□□ -0.12
ZIC3O60481 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC3O60481 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC3O60481 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC3O60481 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.27□□□□□ -0.12
ZIC3O60481 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZIC3O60481 SLC7A15P-201ENST00000424028 1363 ntBASIC14.27□□□□□ -0.12
ZIC3O60481 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
ZIC3O60481 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.27□□□□□ -0.12
ZIC3O60481 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC3O60481 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.27□□□□□ -0.13
ZIC3O60481 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC3O60481 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC3O60481 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC3O60481 AL035633.1-201ENST00000406139 838 ntBASIC14.27□□□□□ -0.13
ZIC3O60481 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ZIC3O60481 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.27□□□□□ -0.13
ZIC3O60481 MEP1AP4-201ENST00000423244 1087 ntBASIC14.27□□□□□ -0.13
ZIC3O60481 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.27□□□□□ -0.13
ZIC3O60481 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC3O60481 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC3O60481 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.27□□□□□ -0.13
ZIC3O60481 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.27□□□□□ -0.13
ZIC3O60481 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.27□□□□□ -0.13
ZIC3O60481 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
ZIC3O60481 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.27□□□□□ -0.13
ZIC3O60481 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC3O60481 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.27□□□□□ -0.13
ZIC3O60481 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.27□□□□□ -0.13
ZIC3O60481 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC3O60481 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC3O60481 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
ZIC3O60481 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC3O60481 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC3O60481 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC3O60481 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ZIC3O60481 AP005117.1-202ENST00000581724 1908 ntBASIC14.27□□□□□ -0.13
ZIC3O60481 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC3O60481 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC3O60481 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZIC3O60481 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
ZIC3O60481 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.27□□□□□ -0.13
ZIC3O60481 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.27□□□□□ -0.13
ZIC3O60481 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
ZIC3O60481 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ZIC3O60481 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC3O60481 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.26□□□□□ -0.13
ZIC3O60481 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.26□□□□□ -0.13
ZIC3O60481 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC3O60481 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC3O60481 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.26□□□□□ -0.13
ZIC3O60481 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.26□□□□□ -0.13
ZIC3O60481 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC3O60481 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC3O60481 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC3O60481 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.26□□□□□ -0.13
ZIC3O60481 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.26□□□□□ -0.13
ZIC3O60481 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC3O60481 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.26□□□□□ -0.13
ZIC3O60481 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC3O60481 AL391825.1-201ENST00000457671 1364 ntBASIC14.26□□□□□ -0.13
ZIC3O60481 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.26□□□□□ -0.13
ZIC3O60481 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.26□□□□□ -0.13
ZIC3O60481 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC3O60481 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZIC3O60481 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.26□□□□□ -0.13
ZIC3O60481 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ZIC3O60481 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.26□□□□□ -0.13
ZIC3O60481 COX20P2-201ENST00000452636 358 ntBASIC14.26□□□□□ -0.13
ZIC3O60481 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.26□□□□□ -0.13
ZIC3O60481 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ZIC3O60481 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms