Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.07□□□□□ -0.32
SSSCA1O60232 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.07□□□□□ -0.32
SSSCA1O60232 AGAP7P-201ENST00000582299 2062 ntBASIC13.07□□□□□ -0.32
SSSCA1O60232 AGAP14-201ENST00000624701 2060 ntBASIC13.07□□□□□ -0.32
SSSCA1O60232 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SSSCA1O60232 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.07□□□□□ -0.32
SSSCA1O60232 AC129492.6-201ENST00000611383 1305 ntBASIC13.07□□□□□ -0.32
SSSCA1O60232 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.07□□□□□ -0.32
SSSCA1O60232 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.06□□□□□ -0.32
SSSCA1O60232 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.06□□□□□ -0.32
SSSCA1O60232 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.06□□□□□ -0.32
SSSCA1O60232 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 AC232323.1-201ENST00000540724 2099 ntBASIC13.06□□□□□ -0.32
SSSCA1O60232 REXO1L5P-201ENST00000622260 2098 ntBASIC13.06□□□□□ -0.32
SSSCA1O60232 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
SSSCA1O60232 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.06□□□□□ -0.32
SSSCA1O60232 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.06□□□□□ -0.32
SSSCA1O60232 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SSSCA1O60232 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
SSSCA1O60232 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SSSCA1O60232 ELK2BP-201ENST00000415014 1224 ntBASIC13.06□□□□□ -0.32
SSSCA1O60232 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 AC026396.1-201ENST00000419388 421 ntBASIC13.06□□□□□ -0.32
SSSCA1O60232 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.06□□□□□ -0.32
SSSCA1O60232 AC106795.1-205ENST00000512851 1056 ntBASIC13.06□□□□□ -0.32
SSSCA1O60232 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.06□□□□□ -0.32
SSSCA1O60232 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.06□□□□□ -0.32
SSSCA1O60232 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.06□□□□□ -0.32
SSSCA1O60232 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.06□□□□□ -0.32
SSSCA1O60232 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.06□□□□□ -0.32
SSSCA1O60232 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SSSCA1O60232 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
SSSCA1O60232 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SSSCA1O60232 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.06□□□□□ -0.32
SSSCA1O60232 AC012569.1-201ENST00000591191 1524 ntBASIC13.06□□□□□ -0.32
SSSCA1O60232 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.06□□□□□ -0.32
SSSCA1O60232 AC013726.1-201ENST00000563747 2285 ntBASIC13.06□□□□□ -0.32
SSSCA1O60232 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SSSCA1O60232 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
SSSCA1O60232 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SSSCA1O60232 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.06□□□□□ -0.32
SSSCA1O60232 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.06□□□□□ -0.32
SSSCA1O60232 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSSCA1O60232 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
SSSCA1O60232 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.05□□□□□ -0.32
SSSCA1O60232 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
SSSCA1O60232 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.05□□□□□ -0.32
SSSCA1O60232 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.05□□□□□ -0.32
SSSCA1O60232 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.05□□□□□ -0.32
SSSCA1O60232 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.05□□□□□ -0.32
SSSCA1O60232 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SSSCA1O60232 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.05□□□□□ -0.32
SSSCA1O60232 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.05□□□□□ -0.32
SSSCA1O60232 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SSSCA1O60232 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SSSCA1O60232 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSSCA1O60232 AL031133.1-201ENST00000406807 723 ntBASIC13.05□□□□□ -0.32
SSSCA1O60232 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms