Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.74□□□□□ -0.05
IDH3BO43837 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.73□□□□□ -0.05
IDH3BO43837 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
IDH3BO43837 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.73□□□□□ -0.05
IDH3BO43837 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.73□□□□□ -0.05
IDH3BO43837 AC007686.3-201ENST00000619017 3487 ntBASIC14.73□□□□□ -0.05
IDH3BO43837 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
IDH3BO43837 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
IDH3BO43837 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.73□□□□□ -0.05
IDH3BO43837 AC012640.2-201ENST00000561606 901 ntBASIC14.73□□□□□ -0.05
IDH3BO43837 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.73□□□□□ -0.05
IDH3BO43837 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
IDH3BO43837 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
IDH3BO43837 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.73□□□□□ -0.05
IDH3BO43837 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
IDH3BO43837 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.73□□□□□ -0.05
IDH3BO43837 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
IDH3BO43837 AC087386.2-201ENST00000623212 4637 ntBASIC14.73□□□□□ -0.05
IDH3BO43837 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
IDH3BO43837 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IDH3BO43837 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IDH3BO43837 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
IDH3BO43837 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IDH3BO43837 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.72□□□□□ -0.05
IDH3BO43837 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IDH3BO43837 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
IDH3BO43837 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.72□□□□□ -0.05
IDH3BO43837 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IDH3BO43837 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.72□□□□□ -0.05
IDH3BO43837 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
IDH3BO43837 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.72□□□□□ -0.05
IDH3BO43837 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
IDH3BO43837 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.72□□□□□ -0.05
IDH3BO43837 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IDH3BO43837 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IDH3BO43837 AC007292.2-201ENST00000593524 1812 ntBASIC14.72□□□□□ -0.05
IDH3BO43837 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IDH3BO43837 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IDH3BO43837 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.72□□□□□ -0.05
IDH3BO43837 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.72□□□□□ -0.05
IDH3BO43837 UNC93B7-201ENST00000509439 705 ntBASIC14.72□□□□□ -0.05
IDH3BO43837 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.72□□□□□ -0.05
IDH3BO43837 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
IDH3BO43837 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.72□□□□□ -0.05
IDH3BO43837 AC012313.10-201ENST00000623509 926 ntBASIC14.72□□□□□ -0.05
IDH3BO43837 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.72□□□□□ -0.05
IDH3BO43837 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.72□□□□□ -0.05
IDH3BO43837 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IDH3BO43837 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
IDH3BO43837 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.72□□□□□ -0.05
IDH3BO43837 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IDH3BO43837 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
IDH3BO43837 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
IDH3BO43837 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
IDH3BO43837 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
IDH3BO43837 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
IDH3BO43837 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
IDH3BO43837 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
IDH3BO43837 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
IDH3BO43837 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
IDH3BO43837 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
IDH3BO43837 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
IDH3BO43837 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
IDH3BO43837 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
IDH3BO43837 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
IDH3BO43837 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
IDH3BO43837 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
IDH3BO43837 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.71□□□□□ -0.05
IDH3BO43837 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
IDH3BO43837 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
IDH3BO43837 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
IDH3BO43837 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
IDH3BO43837 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
IDH3BO43837 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.71□□□□□ -0.05
IDH3BO43837 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
IDH3BO43837 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
IDH3BO43837 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms