Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.89■□□□□ 0.45
DDX39AO00148 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.89■□□□□ 0.45
DDX39AO00148 TIMM17BP1-201ENST00000545713 516 ntBASIC17.89■□□□□ 0.45
DDX39AO00148 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
DDX39AO00148 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.89■□□□□ 0.45
DDX39AO00148 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.89■□□□□ 0.45
DDX39AO00148 CHCHD2P3-201ENST00000603038 451 ntBASIC17.89■□□□□ 0.45
DDX39AO00148 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX39AO00148 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DDX39AO00148 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX39AO00148 Z97205.2-201ENST00000564697 1639 ntBASIC17.89■□□□□ 0.45
DDX39AO00148 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX39AO00148 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
DDX39AO00148 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX39AO00148 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
DDX39AO00148 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX39AO00148 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX39AO00148 CDC14C-201ENST00000428251 1719 ntBASIC17.89■□□□□ 0.45
DDX39AO00148 AC069224.1-201ENST00000566372 1715 ntBASIC17.89■□□□□ 0.45
DDX39AO00148 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.89■□□□□ 0.45
DDX39AO00148 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX39AO00148 LINC02447-202ENST00000501888 2146 ntBASIC17.89■□□□□ 0.45
DDX39AO00148 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX39AO00148 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.89■□□□□ 0.45
DDX39AO00148 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
DDX39AO00148 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
DDX39AO00148 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
DDX39AO00148 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.88■□□□□ 0.45
DDX39AO00148 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.88■□□□□ 0.45
DDX39AO00148 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
DDX39AO00148 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.88■□□□□ 0.45
DDX39AO00148 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 KRT18P64-201ENST00000434946 1219 ntBASIC17.88■□□□□ 0.45
DDX39AO00148 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.88■□□□□ 0.45
DDX39AO00148 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.88■□□□□ 0.45
DDX39AO00148 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.88■□□□□ 0.45
DDX39AO00148 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.88■□□□□ 0.45
DDX39AO00148 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.88■□□□□ 0.45
DDX39AO00148 HNRNPUP1-201ENST00000554987 333 ntBASIC17.88■□□□□ 0.45
DDX39AO00148 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.88■□□□□ 0.45
DDX39AO00148 WASH4P-201ENST00000564273 1246 ntBASIC17.88■□□□□ 0.45
DDX39AO00148 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
DDX39AO00148 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.88■□□□□ 0.45
DDX39AO00148 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.88■□□□□ 0.45
DDX39AO00148 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DDX39AO00148 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX39AO00148 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DDX39AO00148 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX39AO00148 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DDX39AO00148 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX39AO00148 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.87■□□□□ 0.45
DDX39AO00148 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX39AO00148 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX39AO00148 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
DDX39AO00148 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.87■□□□□ 0.45
DDX39AO00148 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.87■□□□□ 0.45
DDX39AO00148 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX39AO00148 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
DDX39AO00148 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX39AO00148 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.87■□□□□ 0.45
DDX39AO00148 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.87■□□□□ 0.45
DDX39AO00148 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
DDX39AO00148 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DDX39AO00148 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DDX39AO00148 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX39AO00148 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX39AO00148 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.87■□□□□ 0.45
DDX39AO00148 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.87■□□□□ 0.45
DDX39AO00148 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX39AO00148 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.87■□□□□ 0.45
DDX39AO00148 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
DDX39AO00148 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.87■□□□□ 0.45
DDX39AO00148 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.87■□□□□ 0.45
DDX39AO00148 AC007431.3-201ENST00000623221 587 ntBASIC17.87■□□□□ 0.45
DDX39AO00148 AC025048.6-201ENST00000634326 1161 ntBASIC17.87■□□□□ 0.45
DDX39AO00148 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms