Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 AC046158.3-201ENST00000624947 2558 ntBASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 AC112504.1-201ENST00000623415 1841 ntBASIC11.63□□□□□ -0.55
TRGV1A0A0A0MS02 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 AP002414.2-201ENST00000591780 3365 ntBASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 MKNK2P1-201ENST00000437526 628 ntBASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 ALG1L5P-201ENST00000482043 771 ntBASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 AC079140.1-201ENST00000508039 487 ntBASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 AC073389.1-201ENST00000595595 795 ntBASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV1A0A0A0MS02 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
TRGV1A0A0A0MS02 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms