Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 BNIP3P1-202ENST00000550043 1585 ntBASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 RN7SL828P-201ENST00000607615 303 ntBASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHB13Q9Y5F0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHB13Q9Y5F0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHB13Q9Y5F0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.71■□□□□ 0.42
PCDHB13Q9Y5F0 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHB13Q9Y5F0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
PCDHB13Q9Y5F0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.71■□□□□ 0.42
PCDHB13Q9Y5F0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHB13Q9Y5F0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 CYP4F24P-201ENST00000586049 1580 ntBASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 RWDD4P1-201ENST00000488019 565 ntBASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 AC090953.1-201ENST00000604305 1092 ntBASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 AC020910.4-201ENST00000612269 540 ntBASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHB13Q9Y5F0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB13Q9Y5F0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms