Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 C1QBPP1-201ENST00000400117 770 ntBASIC21.59■■□□□ 1.05
NINLQ9Y2I6 BOLA2P3-201ENST00000404566 256 ntBASIC21.59■■□□□ 1.05
NINLQ9Y2I6 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 GAPDHP40-201ENST00000505218 1006 ntBASIC21.59■■□□□ 1.05
NINLQ9Y2I6 MIR4259-201ENST00000584466 101 ntBASIC21.59■■□□□ 1.05
NINLQ9Y2I6 AC233724.13-201ENST00000598383 410 ntBASIC21.59■■□□□ 1.05
NINLQ9Y2I6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC21.59■■□□□ 1.05
NINLQ9Y2I6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NINLQ9Y2I6 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NINLQ9Y2I6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC21.58■■□□□ 1.05
NINLQ9Y2I6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
NINLQ9Y2I6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
NINLQ9Y2I6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NINLQ9Y2I6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.58■■□□□ 1.05
NINLQ9Y2I6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NINLQ9Y2I6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NINLQ9Y2I6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
NINLQ9Y2I6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
NINLQ9Y2I6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC21.58■■□□□ 1.05
NINLQ9Y2I6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC21.58■■□□□ 1.05
NINLQ9Y2I6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC21.58■■□□□ 1.05
NINLQ9Y2I6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NINLQ9Y2I6 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NINLQ9Y2I6 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NINLQ9Y2I6 HIST1H2BPS3-201ENST00000419683 341 ntBASIC21.58■■□□□ 1.04
NINLQ9Y2I6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NINLQ9Y2I6 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC21.58■■□□□ 1.04
NINLQ9Y2I6 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NINLQ9Y2I6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
NINLQ9Y2I6 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC21.58■■□□□ 1.04
NINLQ9Y2I6 IGHV3OR16-16-201ENST00000563644 343 ntBASIC21.58■■□□□ 1.04
NINLQ9Y2I6 MIR4538-201ENST00000581377 78 ntBASIC21.58■■□□□ 1.04
NINLQ9Y2I6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC21.58■■□□□ 1.04
NINLQ9Y2I6 AC092364.2-201ENST00000596710 2692 ntBASIC21.58■■□□□ 1.04
NINLQ9Y2I6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NINLQ9Y2I6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 AP005482.1-201ENST00000563722 1273 ntBASIC21.57■■□□□ 1.04
NINLQ9Y2I6 PIGL-212ENST00000581006 554 ntTSL 4 BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NINLQ9Y2I6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 AC026691.1-201ENST00000602502 2017 ntBASIC21.56■■□□□ 1.04
NINLQ9Y2I6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 KRT223P-202ENST00000449164 1292 ntBASIC21.56■■□□□ 1.04
NINLQ9Y2I6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 COX11-210ENST00000639671 696 ntBASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms