Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FNDC3AQ9Y2H6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 COX5BP8-201ENST00000416911 349 ntBASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FNDC3AQ9Y2H6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 AP3S2-216ENST00000617003 1561 ntBASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 AC105233.2-201ENST00000523697 349 ntBASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 AF228730.5-201ENST00000530288 346 ntBASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 PCDHA1-201ENST00000378133 2726 ntBASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 U82695.1-201ENST00000635752 1889 ntBASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
FNDC3AQ9Y2H6 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 SPTLC1P1-201ENST00000447199 261 ntBASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.34■□□□□ 0.21
FNDC3AQ9Y2H6 AC007967.4-201ENST00000614700 386 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms