Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 AL627223.1-201ENST00000416693 442 ntBASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 ALG1L8P-201ENST00000533887 760 ntBASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 AC005972.3-201ENST00000606304 481 ntBASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 REXO1L1P-202ENST00000608646 1974 ntBASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 AC004461.1-201ENST00000412461 403 ntBASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 EEF1DP4-201ENST00000446006 880 ntBASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 AL512356.3-201ENST00000623005 461 ntBASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 AL513477.1-201ENST00000602865 2407 ntBASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 KRT8P37-201ENST00000451609 1420 ntBASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 CYP4F24P-201ENST00000586049 1580 ntBASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VPS9D1Q9Y2B5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS9D1Q9Y2B5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS9D1Q9Y2B5 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.9■□□□□ 0.14
VPS9D1Q9Y2B5 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
VPS9D1Q9Y2B5 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VPS9D1Q9Y2B5 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.9■□□□□ 0.14
VPS9D1Q9Y2B5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS9D1Q9Y2B5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.9■□□□□ 0.14
VPS9D1Q9Y2B5 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.9■□□□□ 0.14
VPS9D1Q9Y2B5 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.9■□□□□ 0.14
VPS9D1Q9Y2B5 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS9D1Q9Y2B5 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS9D1Q9Y2B5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.9■□□□□ 0.14
VPS9D1Q9Y2B5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS9D1Q9Y2B5 RPSAP43-201ENST00000402237 625 ntBASIC15.9■□□□□ 0.14
VPS9D1Q9Y2B5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.9■□□□□ 0.14
VPS9D1Q9Y2B5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.9■□□□□ 0.14
VPS9D1Q9Y2B5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms