Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC24.44■■□□□ 1.5
RIMBP3Q9UFD9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC24.44■■□□□ 1.5
RIMBP3Q9UFD9 E2F3P2-201ENST00000447755 1422 ntBASIC24.44■■□□□ 1.5
RIMBP3Q9UFD9 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RIMBP3Q9UFD9 AP001282.1-201ENST00000531301 1499 ntBASIC24.44■■□□□ 1.5
RIMBP3Q9UFD9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
RIMBP3Q9UFD9 AC134407.2-201ENST00000625089 1978 ntBASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 AL008718.2-201ENST00000609206 1313 ntBASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 AL354861.1-201ENST00000445213 355 ntBASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 RBM4-207ENST00000506523 654 ntTSL 3 BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 SRP14-204ENST00000558720 780 ntTSL 2 BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 DBP-202ENST00000593500 712 ntTSL 2 BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 MIR6125-201ENST00000618986 96 ntBASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
RIMBP3Q9UFD9 AC090164.3-201ENST00000610780 2143 ntBASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 RBM38-204ENST00000371219 760 ntTSL 2 BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 RN7SKP175-201ENST00000408472 289 ntBASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 AC010141.1-201ENST00000411585 623 ntBASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 CHCHD2P2-201ENST00000503744 321 ntBASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RIMBP3Q9UFD9 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 AL135901.1-201ENST00000451812 333 ntBASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC24.41■■□□□ 1.5
RIMBP3Q9UFD9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 SHC1P1-201ENST00000425230 1745 ntBASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 FTH1P22-201ENST00000456305 520 ntBASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 CISD2-202ENST00000503643 808 ntTSL 2 BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 AP000911.2-201ENST00000534330 502 ntBASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 AC090510.3-201ENST00000615831 821 ntBASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms