Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 RN7SL769P-201ENST00000469386 295 ntBASIC15.76■□□□□ 0.11
NCDNQ9UBB6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCDNQ9UBB6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 CLUHP6-201ENST00000580789 941 ntBASIC15.75■□□□□ 0.11
NCDNQ9UBB6 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NCDNQ9UBB6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.74■□□□□ 0.11
NCDNQ9UBB6 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 208.2 ms