Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 NUP43-203ENST00000367404 1089 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 USP9YP25-201ENST00000457708 443 ntBASIC19.06■□□□□ 0.64
RNF216Q9NWF9 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 AP001160.2-201ENST00000596071 487 ntBASIC19.06■□□□□ 0.64
RNF216Q9NWF9 AC108865.2-201ENST00000606881 432 ntBASIC19.06■□□□□ 0.64
RNF216Q9NWF9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 AC105052.3-201ENST00000639209 1130 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 PLAC8-201ENST00000311507 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF216Q9NWF9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 CA5BP1-204ENST00000380336 843 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 MCCD1P2-201ENST00000423228 335 ntBASIC19.05■□□□□ 0.64
RNF216Q9NWF9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 AC106901.1-201ENST00000425086 698 ntBASIC19.05■□□□□ 0.64
RNF216Q9NWF9 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 AC005412.2-201ENST00000492004 341 ntBASIC19.05■□□□□ 0.64
RNF216Q9NWF9 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 MTCYBP20-201ENST00000524239 1129 ntBASIC19.05■□□□□ 0.64
RNF216Q9NWF9 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 AP001063.1-201ENST00000568332 529 ntBASIC19.05■□□□□ 0.64
RNF216Q9NWF9 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 GDPD1-205ENST00000581140 1265 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 BNIP3P32-201ENST00000600015 554 ntBASIC19.05■□□□□ 0.64
RNF216Q9NWF9 AC008667.4-201ENST00000607370 168 ntBASIC19.05■□□□□ 0.64
RNF216Q9NWF9 AL512506.1-201ENST00000613918 449 ntBASIC19.05■□□□□ 0.64
RNF216Q9NWF9 AC099552.4-201ENST00000624248 949 ntBASIC19.05■□□□□ 0.64
RNF216Q9NWF9 LINC00969-278ENST00000626870 851 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF216Q9NWF9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 AL138880.1-201ENST00000405824 642 ntBASIC19.04■□□□□ 0.64
RNF216Q9NWF9 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF216Q9NWF9 CDK7P1-201ENST00000434574 693 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms