Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 HYMAI-201ENST00000635591 3347 ntBASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 AC126177.1-201ENST00000547829 2218 ntBASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 SERBP1P3-201ENST00000459980 809 ntBASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 AC022532.1-201ENST00000624563 1728 ntBASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 AC087499.5-201ENST00000452760 1342 ntBASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
BLOC1S4Q9NUP1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 KRT18P64-201ENST00000434946 1219 ntBASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 AC093512.1-201ENST00000617969 520 ntBASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.65■□□□□ 0.42
BLOC1S4Q9NUP1 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
BLOC1S4Q9NUP1 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.64■□□□□ 0.42
BLOC1S4Q9NUP1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.64■□□□□ 0.42
BLOC1S4Q9NUP1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 PMS2P2-201ENST00000425039 1128 ntBASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 AC055876.3-201ENST00000431496 288 ntBASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.64■□□□□ 0.41
BLOC1S4Q9NUP1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms