Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 AC013726.1-201ENST00000563747 2285 ntBASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 LINC00528-201ENST00000600723 2160 ntBASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 AC107918.2-201ENST00000530817 355 ntBASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 MIR1199-201ENST00000621445 119 ntBASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 AL359258.3-201ENST00000622910 2331 ntBASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 AL390755.1-201ENST00000623716 2027 ntBASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCM2LQ9NUG4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 C18orf15-201ENST00000623680 2534 ntBASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 GRK6P1-201ENST00000400595 1711 ntBASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 AL645939.2-201ENST00000427340 991 ntBASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 AC244107.1-201ENST00000442033 332 ntBASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 AC005412.3-201ENST00000580309 715 ntBASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 AC005593.1-201ENST00000624894 515 ntBASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms