Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 AL109936.8-201ENST00000641772 604 ntBASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 AC092127.1-201ENST00000567093 3455 ntBASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC1Q9NTX5 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 AC092850.2-201ENST00000623821 2697 ntBASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 AC074044.1-201ENST00000609673 707 ntBASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC1Q9NTX5 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ECHDC1Q9NTX5 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ECHDC1Q9NTX5 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ECHDC1Q9NTX5 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
ECHDC1Q9NTX5 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.33■□□□□ 0.69
ECHDC1Q9NTX5 AL139384.1-201ENST00000612143 3047 ntBASIC19.33■□□□□ 0.69
ECHDC1Q9NTX5 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.33■□□□□ 0.69
ECHDC1Q9NTX5 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
ECHDC1Q9NTX5 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ECHDC1Q9NTX5 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
ECHDC1Q9NTX5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ECHDC1Q9NTX5 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ECHDC1Q9NTX5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
ECHDC1Q9NTX5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.33■□□□□ 0.69
ECHDC1Q9NTX5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ECHDC1Q9NTX5 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.33■□□□□ 0.68
ECHDC1Q9NTX5 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ECHDC1Q9NTX5 MIR770-201ENST00000390219 98 ntBASIC19.33■□□□□ 0.68
ECHDC1Q9NTX5 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.33■□□□□ 0.68
ECHDC1Q9NTX5 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.33■□□□□ 0.68
ECHDC1Q9NTX5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
ECHDC1Q9NTX5 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ECHDC1Q9NTX5 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms