Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SALL1Q9NSC2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SALL1Q9NSC2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SALL1Q9NSC2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.06■□□□□ 0.64
SALL1Q9NSC2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 KRT18P43-201ENST00000469825 1281 ntBASIC19.05■□□□□ 0.64
SALL1Q9NSC2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 AL359711.2-201ENST00000563105 872 ntBASIC19.05■□□□□ 0.64
SALL1Q9NSC2 AC133539.2-201ENST00000604757 467 ntBASIC19.05■□□□□ 0.64
SALL1Q9NSC2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 LINC02447-202ENST00000501888 2146 ntBASIC19.05■□□□□ 0.64
SALL1Q9NSC2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SALL1Q9NSC2 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 KRT8P22-201ENST00000562317 1415 ntBASIC19.04■□□□□ 0.64
SALL1Q9NSC2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 RPL13AP25-201ENST00000484130 612 ntBASIC19.04■□□□□ 0.64
SALL1Q9NSC2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 RAB43P1-201ENST00000561790 589 ntBASIC19.04■□□□□ 0.64
SALL1Q9NSC2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 AC017083.2-201ENST00000608069 979 ntBASIC19.04■□□□□ 0.64
SALL1Q9NSC2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 INTS4P2-202ENST00000614726 2019 ntBASIC19.04■□□□□ 0.64
SALL1Q9NSC2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 AC018892.3-201ENST00000623986 2499 ntBASIC19.04■□□□□ 0.64
SALL1Q9NSC2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 AC046158.3-201ENST00000624947 2558 ntBASIC19.04■□□□□ 0.64
SALL1Q9NSC2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.04■□□□□ 0.64
SALL1Q9NSC2 AL121723.1-201ENST00000445194 1519 ntBASIC19.03■□□□□ 0.64
SALL1Q9NSC2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.03■□□□□ 0.64
SALL1Q9NSC2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 AC008894.3-201ENST00000624324 3103 ntBASIC19.03■□□□□ 0.64
SALL1Q9NSC2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms