Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 FAM86EP-206ENST00000510506 987 ntBASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 AP001269.4-201ENST00000609611 512 ntBASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 AC116407.4-201ENST00000623319 1061 ntBASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 AL139288.1-201ENST00000623748 933 ntBASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 AL359258.3-201ENST00000622910 2331 ntBASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 GRK6P1-201ENST00000400595 1711 ntBASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 PI4KAP1-204ENST00000612579 1703 ntBASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SND1-IT1Q9HBX3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 AL592424.1-201ENST00000563624 1536 ntBASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 DMBT1P1-203ENST00000636837 4628 ntBASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 TMPOP1-202ENST00000424642 1267 ntBASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 NKAPP1-205ENST00000585790 367 ntBASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms